FFCP PHASE1:Hg19::chr5:133449741..133449744,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:133449741..133449744,- | |||
|coexpression_cluster_id=C1137 | |coexpression_cluster_id=C1137 | ||
|description=CAGE_peak_at_chr5:133449741..133449744,- | |description=CAGE_peak_at_chr5:133449741..133449744,- | ||
|id=chr5:133449741..133449744,- | |id=chr5:133449741..133449744,- | ||
|ontology_enrichment_celltype=CL:0000791!8.90e-32!18;CL:0000789!8.90e-32!18;CL:0002420!8.90e-32!18;CL:0002419!8.90e-32!18;CL:0000790!8.90e-32!18;CL:0000084!2.66e-30!25;CL:0000827!2.66e-30!25;CL:0000838!8.41e-25!52;CL:0000542!3.03e-24!53;CL:0000051!3.03e-24!53;CL:0000625!1.04e-23!11;CL:0002087!2.47e-17!119;CL:0000738!1.52e-16!140;CL:0000623!5.71e-14!3;CL:0000825!5.71e-14!3;CL:0002031!1.49e-13!124;CL:0000037!2.86e-12!172;CL:0000566!2.86e-12!172;CL:0000624!9.46e-12!6;CL:0000988!3.02e-11!182;CL:0002032!8.68e-10!165;CL:0000837!8.68e-10!165 | |ontology_enrichment_celltype=CL:0000791!8.90e-32!18;CL:0000789!8.90e-32!18;CL:0002420!8.90e-32!18;CL:0002419!8.90e-32!18;CL:0000790!8.90e-32!18;CL:0000084!2.66e-30!25;CL:0000827!2.66e-30!25;CL:0000838!8.41e-25!52;CL:0000542!3.03e-24!53;CL:0000051!3.03e-24!53;CL:0000625!1.04e-23!11;CL:0002087!2.47e-17!119;CL:0000738!1.52e-16!140;CL:0000623!5.71e-14!3;CL:0000825!5.71e-14!3;CL:0002031!1.49e-13!124;CL:0000037!2.86e-12!172;CL:0000566!2.86e-12!172;CL:0000624!9.46e-12!6;CL:0000988!3.02e-11!182;CL:0002032!8.68e-10!165;CL:0000837!8.68e-10!165 | ||
|ontology_enrichment_celltype_v019=CL:0000623;6.43e-23;3!CL:0000084;1.53e-16;25!CL:0000791;5.48e-15;18!CL:0000789;5.48e-15;18!CL:0002419;5.48e-15;18!CL:0000624;5.67e-12;6!CL:0000542;2.83e-09;53!CL:0000625;6.16e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.76e-23,3;CL:0000825,5.76e-23,3;CL:0000084,1.56e-16,25;CL:0000827,1.56e-16,25;CL:0000838,3.74e-15,52;CL:0000791,4.74e-15,18;CL:0000789,4.74e-15,18;CL:0002420,4.74e-15,18;CL:0002419,4.74e-15,18;CL:0000790,4.74e-15,18;CL:0000542,7.33e-15,53;CL:0000051,7.33e-15,53;CL:0000624,6.34e-12,6;CL:0002087,1.53e-08,115;CL:0002031,3.67e-08,120;CL:0000738,3.94e-07,136;CL:0000625,5.15e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.48e-15;18!CL:0000051;2.83e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.68e-10;2!UBERON:0005058;8.68e-10;2!UBERON:0009113;8.68e-10;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr5:133449741..133449744,- | |short_description=p@chr5:133449741..133449744,- | ||
}} | }} |
Latest revision as of 09:45, 30 July 2015
Short description: | p@chr5:133449741..133449744, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133449741..133449744, - |
Coexpression cluster: | C1137_CD4_CD8_thymus_Natural_blood_Whole_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.76e-23 | 3 |
pro-NK cell | 5.76e-23 | 3 |
T cell | 1.56e-16 | 25 |
pro-T cell | 1.56e-16 | 25 |
lymphoid lineage restricted progenitor cell | 3.74e-15 | 52 |
mature alpha-beta T cell | 4.74e-15 | 18 |
alpha-beta T cell | 4.74e-15 | 18 |
immature T cell | 4.74e-15 | 18 |
mature T cell | 4.74e-15 | 18 |
immature alpha-beta T cell | 4.74e-15 | 18 |
lymphocyte | 7.33e-15 | 53 |
common lymphoid progenitor | 7.33e-15 | 53 |
CD4-positive, alpha-beta T cell | 6.34e-12 | 6 |
nongranular leukocyte | 1.53e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.67e-08 | 120 |
leukocyte | 3.94e-07 | 136 |
CD8-positive, alpha-beta T cell | 5.15e-07 | 11 |