FFCP PHASE1:Hg19::chr5:134364965..134364981,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:134364965..134364981,- | |||
|coexpression_cluster_id=C2802 | |||
|description=CAGE_peak_at_chr5:134364965..134364981,- | |description=CAGE_peak_at_chr5:134364965..134364981,- | ||
|id=chr5:134364965..134364981,- | |id=chr5:134364965..134364981,- | ||
|ontology_enrichment_celltype=CL:0002076!1.63e-08!43;CL:0002623!7.81e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.63e-08!43;CL:0002623!7.81e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;1.76e-12;3!CL:0002504;3.99e-12;3!CL:1000279;3.99e-12;3!CL:1000280;3.99e-12;3!CL:0000622;7.84e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.44e-12,3;CL:0002504,4.72e-12,3;CL:1000279,4.72e-12,3;CL:1000280,4.72e-12,3;CL:0000622,6.97e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.74e-10;1!UBERON:0006298;1.55e-09;1!UBERON:0008801;1.55e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!1.28e-16!129;UBERON:0004185!1.28e-16!129;UBERON:0000161!8.08e-16!35;UBERON:0001007!5.25e-15!155;UBERON:0001555!5.25e-15!155;UBERON:0007026!5.25e-15!155;UBERON:0004119!8.91e-15!169;UBERON:0000925!8.91e-15!169;UBERON:0006595!8.91e-15!169;UBERON:0001004!1.90e-13!72;UBERON:0000166!2.37e-12!21;UBERON:0001044!1.08e-11!6;UBERON:0003293!1.08e-11!6;UBERON:0003294!1.08e-11!6;UBERON:0010047!1.08e-11!6;UBERON:0000167!1.08e-11!6;UBERON:0000165!6.51e-10!28;UBERON:0000930!6.51e-10!28;UBERON:0000077!1.35e-09!130;UBERON:0001557!6.15e-09!19;UBERON:0000078!7.35e-09!18;UBERON:0001041!1.12e-08!98;UBERON:0000072!1.25e-08!46;UBERON:0000065!1.38e-08!53;UBERON:0001737!2.32e-08!9;UBERON:0003101!4.93e-07!22;UBERON:0000079!4.93e-07!22 | |ontology_enrichment_uberon=UBERON:0004921!1.28e-16!129;UBERON:0004185!1.28e-16!129;UBERON:0000161!8.08e-16!35;UBERON:0001007!5.25e-15!155;UBERON:0001555!5.25e-15!155;UBERON:0007026!5.25e-15!155;UBERON:0004119!8.91e-15!169;UBERON:0000925!8.91e-15!169;UBERON:0006595!8.91e-15!169;UBERON:0001004!1.90e-13!72;UBERON:0000166!2.37e-12!21;UBERON:0001044!1.08e-11!6;UBERON:0003293!1.08e-11!6;UBERON:0003294!1.08e-11!6;UBERON:0010047!1.08e-11!6;UBERON:0000167!1.08e-11!6;UBERON:0000165!6.51e-10!28;UBERON:0000930!6.51e-10!28;UBERON:0000077!1.35e-09!130;UBERON:0001557!6.15e-09!19;UBERON:0000078!7.35e-09!18;UBERON:0001041!1.12e-08!98;UBERON:0000072!1.25e-08!46;UBERON:0000065!1.38e-08!53;UBERON:0001737!2.32e-08!9;UBERON:0003101!4.93e-07!22;UBERON:0000079!4.93e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.28e-22;6!UBERON:0003293;1.28e-22;6!UBERON:0003294;1.28e-22;6!UBERON:0010047;1.28e-22;6!UBERON:0003408;1.28e-22;6!UBERON:0000167;1.28e-22;6!UBERON:0001041;2.36e-21;14!UBERON:0004921;8.90e-21;33!UBERON:0000007;7.10e-18;2!UBERON:0001829;2.41e-17;2!UBERON:0000165;5.46e-14;28!UBERON:0001723;3.99e-12;3!UBERON:0001033;3.99e-12;3!UBERON:0000161;5.25e-11;19!UBERON:0000166;5.25e-11;19!UBERON:0001555;2.86e-10;54!UBERON:0002372;4.46e-10;1!UBERON:0001961;4.46e-10;1!UBERON:0001744;4.46e-10;1!UBERON:0001042;4.46e-10;1!UBERON:0001735;4.46e-10;1!UBERON:0001831;1.55e-09;1!UBERON:0001736;1.55e-09;1!UBERON:0001567;1.55e-09;1!UBERON:0003296;2.13e-09;4!UBERON:0010133;2.13e-09;4!UBERON:0002367;3.00e-07;11!UBERON:0010147;3.00e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.18e-22,6;UBERON:0003293,1.18e-22,6;UBERON:0003294,1.18e-22,6;UBERON:0010047,1.18e-22,6;UBERON:0000167,1.18e-22,6;UBERON:0000161,1.40e-21,36;UBERON:0000166,4.69e-18,22;UBERON:0000007,9.58e-18,2;UBERON:0001829,2.85e-17,2;UBERON:0003408,1.08e-13,10;UBERON:0000165,1.61e-13,29;UBERON:0000930,1.61e-13,29;UBERON:0004921,3.68e-13,118;UBERON:0001723,3.37e-12,3;UBERON:0001033,3.37e-12,3;UBERON:0010056,3.37e-12,3;UBERON:0001007,3.10e-10,145;UBERON:0001555,3.10e-10,145;UBERON:0007026,3.10e-10,145;UBERON:0002530,4.36e-10,59;UBERON:0002372,4.46e-10,1;UBERON:0001961,4.46e-10,1;UBERON:0001744,4.46e-10,1;UBERON:0001735,4.46e-10,1;UBERON:0001736,1.15e-09,1;UBERON:0006298,1.15e-09,1;UBERON:0001831,2.46e-09,1;UBERON:0001567,2.46e-09,1;UBERON:0008801,2.46e-09,1;UBERON:0003296,2.46e-09,4;UBERON:0010133,2.46e-09,4;UBERON:0004119,4.94e-09,160;UBERON:0000925,4.94e-09,160;UBERON:0006595,4.94e-09,160;UBERON:0001042,3.22e-08,10;UBERON:0009145,3.22e-08,10;UBERON:0001444,1.10e-07,49;UBERON:0000153,1.18e-07,62;UBERON:0007811,1.18e-07,62;UBERON:0011216,1.19e-07,223;UBERON:0006562,1.64e-07,11;UBERON:0002367,3.24e-07,11;UBERON:0010147,3.24e-07,11;UBERON:0009846,3.24e-07,11;UBERON:0003353,3.24e-07,11;UBERON:0004902,3.24e-07,11;UBERON:0003820,3.24e-07,11;UBERON:0009847,3.24e-07,11;UBERON:0003102,7.32e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,1.30361867064741,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.674338760312407,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833296006426766,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,2.17048642156577,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,1.93370076765382,1.03333003348146,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,2.15846949099978,1.37268514868027,0.471249609382746,0,0,0,0.975267478179181,0,0,0,1.1312434556297,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,0.294747123039363,0,0,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68900326502395,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.692552326534174,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0.282706142867882,0,0,0,0.611030144933625,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.0730893170861856,0,7.95309935205039,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.707082103850386,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,3.03482802118316,1.13831095675649,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0.801711364730253,0.62164849248911,2.3900586793153,3.45629830907046,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0.0802413666891683,2.19100916473955,1.83491713361816,0,0,0,0,0.5290268405154,1.11598505450025,0,0,0,0,0.380095503034311,0.101988829741982,0,0.18378979906969,0.250707539292375,0.0757786982182394,0.803892390468535,0,0,1.91910583710883,0.23806443146374,0,0,0,0,0,2.17716747896961,1.71116650542641,3.16554649168561,0.573777643141411,0.99798106963804,0,0.106727345877715,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,1.30361867064741,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.674338760312407,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833296006426766,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,2.17048642156577,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,1.93370076765382,1.03333003348146,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,2.15846949099978,1.37268514868027,0.471249609382746,0,0,0,0.975267478179181,0,0,0,1.1312434556297,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,0.294747123039363,0,0,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68900326502395,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.692552326534174,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0.282706142867882,0,0,0,0.611030144933625,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.0730893170861856,0,7.95309935205039,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.707082103850386,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,3.03482802118316,1.13831095675649,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0.801711364730253,0.62164849248911,2.3900586793153,3.45629830907046,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0.0802413666891683,2.19100916473955,1.83491713361816,0,0,0,0,0.5290268405154,1.11598505450025,0,0,0,0,0.380095503034311,0.101988829741982,0,0.18378979906969,0.250707539292375,0.0757786982182394,0.803892390468535,0,0,1.91910583710883,0.23806443146374,0,0,0,0,0,2.17716747896961,1.71116650542641,3.16554649168561,0.573777643141411,0.99798106963804,0,0.106727345877715,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr5:134364965..134364981,- | |short_description=p@chr5:134364965..134364981,- | ||
}} | }} |
Latest revision as of 09:55, 30 July 2015
Short description: | p@chr5:134364965..134364981, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134364965..134364981, - |
Coexpression cluster: | C2802_esophagus_Prostate_biphenotypic_cervical_tonsil_Smooth_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.44e-12 | 3 |
enteric smooth muscle cell | 4.72e-12 | 3 |
smooth muscle cell of large intestine | 4.72e-12 | 3 |
smooth muscle cell of colon | 4.72e-12 | 3 |
acinar cell | 6.97e-08 | 5 |