FFCP PHASE1:Hg19::chr5:135331152..135331163,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135331152..135331163,+ | |||
|coexpression_cluster_id=C139 | |coexpression_cluster_id=C139 | ||
|description=CAGE_peak_at_chr5:135331152..135331163,+ | |description=CAGE_peak_at_chr5:135331152..135331163,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!9.52e-27!9;CL:0000064!3.82e-13!3;CL:0005012!3.82e-13!3;CL:0000067!3.82e-13!3;CL:0002304!3.82e-13!3;CL:0000594!8.95e-13!3;CL:0000680!2.32e-12!57;CL:0000056!2.32e-12!57;CL:0000355!2.32e-12!57;CL:0000187!2.51e-11!54;CL:0000183!4.15e-10!59;CL:0000393!6.88e-10!60;CL:0000211!6.88e-10!60;CL:0002594!7.77e-10!4;CL:0002617!8.84e-09!2;CL:0000055!9.17e-09!180 | |ontology_enrichment_celltype=CL:0000188!9.52e-27!9;CL:0000064!3.82e-13!3;CL:0005012!3.82e-13!3;CL:0000067!3.82e-13!3;CL:0002304!3.82e-13!3;CL:0000594!8.95e-13!3;CL:0000680!2.32e-12!57;CL:0000056!2.32e-12!57;CL:0000355!2.32e-12!57;CL:0000187!2.51e-11!54;CL:0000183!4.15e-10!59;CL:0000393!6.88e-10!60;CL:0000211!6.88e-10!60;CL:0002594!7.77e-10!4;CL:0002617!8.84e-09!2;CL:0000055!9.17e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.22e-15;6!CL:0002255;1.22e-15;6!CL:0000054;1.85e-12;2!CL:0000137;1.85e-12;2!CL:0000092;1.85e-12;2!CL:0000515;1.30e-08;3!CL:0000056;9.10e-07;4 | |ontology_enrichment_celltype_v019=CL:0002149;1.22e-15;6!CL:0002255;1.22e-15;6!CL:0000054;1.85e-12;2!CL:0000137;1.85e-12;2!CL:0000092;1.85e-12;2!CL:0000515;1.30e-08;3!CL:0000056;9.10e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.05e-15,6;CL:0002255,1.05e-15,6;CL:0000054,1.85e-12,2;CL:0000137,1.85e-12,2;CL:0000092,1.85e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;8.84e-10;10!UBERON:0006238;5.00e-09;10!CL:0000515;9.10e-07;4 | |ontology_enrichment_development_v019=UBERON:0005795;8.84e-10;10!UBERON:0006238;5.00e-09;10!CL:0000515;9.10e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;1.22e-15;6!DOID:200;1.85e-12;2!DOID:4305;1.85e-12;2!DOID:3093;2.37e-08;11 | |ontology_enrichment_disease_v019=DOID:3001;1.22e-15;6!DOID:200;1.85e-12;2!DOID:4305;1.85e-12;2!DOID:3093;2.37e-08;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,1.05e-15,6;DOID:200,1.85e-12,2;DOID:4305,1.85e-12,2;DOID:3093,2.29e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0001778!3.82e-13!3;UBERON:0001775!3.82e-13!3;UBERON:0001134!2.50e-11!61;UBERON:0002036!2.50e-11!61;UBERON:0003082!2.50e-11!61;UBERON:0002385!7.31e-11!63;UBERON:0001015!7.31e-11!63;UBERON:0000383!7.31e-11!63;UBERON:0000488!5.75e-10!4;UBERON:0001310!7.77e-10!4;UBERON:0004290!1.91e-09!70;UBERON:0000914!1.29e-08!83;UBERON:0002329!1.29e-08!83;UBERON:0003077!1.29e-08!83;UBERON:0003059!1.29e-08!83;UBERON:0007282!1.29e-08!83;UBERON:0009618!1.29e-08!83;UBERON:0007285!1.29e-08!83;UBERON:0000486!1.37e-07!82;UBERON:0002203!9.04e-07!6;UBERON:0001768!9.04e-07!6 | |ontology_enrichment_uberon=UBERON:0001778!3.82e-13!3;UBERON:0001775!3.82e-13!3;UBERON:0001134!2.50e-11!61;UBERON:0002036!2.50e-11!61;UBERON:0003082!2.50e-11!61;UBERON:0002385!7.31e-11!63;UBERON:0001015!7.31e-11!63;UBERON:0000383!7.31e-11!63;UBERON:0000488!5.75e-10!4;UBERON:0001310!7.77e-10!4;UBERON:0004290!1.91e-09!70;UBERON:0000914!1.29e-08!83;UBERON:0002329!1.29e-08!83;UBERON:0003077!1.29e-08!83;UBERON:0003059!1.29e-08!83;UBERON:0007282!1.29e-08!83;UBERON:0009618!1.29e-08!83;UBERON:0007285!1.29e-08!83;UBERON:0000486!1.37e-07!82;UBERON:0002203!9.04e-07!6;UBERON:0001768!9.04e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.27e-07;31!UBERON:0001015;7.27e-07;31!UBERON:0000383;7.27e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002385;7.27e-07;31!UBERON:0001015;7.27e-07;31!UBERON:0000383;7.27e-07;31 | ||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44001587150888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,1.5350367472613,0.137836572484531,0.644521469209642,0.145016693914229,0.426133137080504,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0104535629848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73370353940911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.466311601748341,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4324388592045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:135331152..135331163,+ | |short_description=p@chr5:135331152..135331163,+ | ||
}} | }} |
Latest revision as of 10:00, 30 July 2015
Short description: | p@chr5:135331152..135331163, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:135331152..135331163, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.05e-15 | 6 |
stromal cell of endometrium | 1.05e-15 | 6 |
bone matrix secreting cell | 1.85e-12 | 2 |
osteocyte | 1.85e-12 | 2 |
osteoclast | 1.85e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.05e-15 | 6 |
giant cell tumor | 1.85e-12 | 2 |
bone giant cell tumor | 1.85e-12 | 2 |
nervous system cancer | 2.29e-08 | 11 |