FFCP PHASE1:Hg19::chr5:146780443..146780454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:146780443..146780454,- | |||
|description=CAGE_peak_at_chr5:146780443..146780454,- | |description=CAGE_peak_at_chr5:146780443..146780454,- | ||
|id=chr5:146780443..146780454,- | |id=chr5:146780443..146780454,- | ||
|ontology_enrichment_celltype=CL:0000359!6.22e-23!32;CL:0000192!6.17e-20!42;CL:0000514!6.17e-20!42;CL:0000680!3.74e-16!57;CL:0000056!3.74e-16!57;CL:0000355!3.74e-16!57;CL:0000187!7.78e-16!54;CL:0000183!2.02e-15!59;CL:0000393!1.21e-13!60;CL:0000211!1.21e-13!60;CL:0002334!4.04e-11!12;CL:0000048!4.45e-11!430;CL:0000034!8.79e-11!444;CL:0000723!1.09e-10!436;CL:0002594!3.51e-10!4;CL:0000055!9.81e-10!180;CL:0002595!2.53e-08!5;CL:0000144!2.57e-08!625;CL:0000222!2.84e-08!119;CL:0002615!4.58e-08!3;CL:0002579!4.69e-08!3;CL:0002371!4.89e-08!591;CL:0000136!6.64e-07!15 | |ontology_enrichment_celltype=CL:0000359!6.22e-23!32;CL:0000192!6.17e-20!42;CL:0000514!6.17e-20!42;CL:0000680!3.74e-16!57;CL:0000056!3.74e-16!57;CL:0000355!3.74e-16!57;CL:0000187!7.78e-16!54;CL:0000183!2.02e-15!59;CL:0000393!1.21e-13!60;CL:0000211!1.21e-13!60;CL:0002334!4.04e-11!12;CL:0000048!4.45e-11!430;CL:0000034!8.79e-11!444;CL:0000723!1.09e-10!436;CL:0002594!3.51e-10!4;CL:0000055!9.81e-10!180;CL:0002595!2.53e-08!5;CL:0000144!2.57e-08!625;CL:0000222!2.84e-08!119;CL:0002615!4.58e-08!3;CL:0002579!4.69e-08!3;CL:0002371!4.89e-08!591;CL:0000136!6.64e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002568;7.88e-13;1!CL:0000569;2.53e-12;4!CL:0002581;2.75e-12;1!CL:0002616;2.75e-12;1!CL:0002594;2.92e-12;4!CL:0000359;5.18e-08;32!CL:0000134;2.32e-07;55!CL:0002494;7.30e-07;16!CL:0002589;9.01e-07;2!CL:0002593;9.01e-07;2 | |ontology_enrichment_celltype_v019=CL:0002568;7.88e-13;1!CL:0000569;2.53e-12;4!CL:0002581;2.75e-12;1!CL:0002616;2.75e-12;1!CL:0002594;2.92e-12;4!CL:0000359;5.18e-08;32!CL:0000134;2.32e-07;55!CL:0002494;7.30e-07;16!CL:0002589;9.01e-07;2!CL:0002593;9.01e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002568,7.89e-13,1;CL:0002616,2.20e-12,1;CL:0002581,2.46e-12,1;CL:0000569,2.61e-12,4;CL:0000011,2.61e-12,4;CL:0002594,2.92e-12,4;CL:0000359,1.44e-08,32;CL:0002589,7.20e-07,2;CL:0002494,7.53e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000011;2.53e-12;4 | |ontology_enrichment_development_v019=CL:0000011;2.53e-12;4 | ||
|ontology_enrichment_disease=DOID:2394!4.56e-16!14;DOID:193!5.31e-08!29;DOID:120!3.08e-07!27 | |ontology_enrichment_disease=DOID:2394!4.56e-16!14;DOID:193!5.31e-08!29;DOID:120!3.08e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.18e-13;14!DOID:120;7.75e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;5.18e-13;14!DOID:120;7.75e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.97e-13,14;DOID:120,6.79e-07,27 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005406,6.12e-23,2;UBERON:0001310,2.92e-12,4;UBERON:0002118,6.51e-10,5;UBERON:0000992,2.55e-08,13;UBERON:0003688,4.04e-08,6;UBERON:0002358,4.04e-08,6;UBERON:0003684,4.04e-08,6;UBERON:0001178,4.04e-08,6;UBERON:0001529,7.20e-07,2;UBERON:0007204,7.20e-07,2 | |||
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|short_description=p@chr5:146780443..146780454,- | |short_description=p@chr5:146780443..146780454,- | ||
}} | }} |
Latest revision as of 11:10, 30 July 2015
Short description: | p@chr5:146780443..146780454, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:146780443..146780454, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 7.89e-13 | 1 |
perirenal adipocyte cell | 2.20e-12 | 1 |
perirenal preadipocyte | 2.46e-12 | 1 |
cardiac mesenchymal cell | 2.61e-12 | 4 |
migratory trunk neural crest cell | 2.61e-12 | 4 |
smooth muscle cell of the umbilical artery | 2.92e-12 | 4 |
vascular associated smooth muscle cell | 1.44e-08 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 7.20e-07 | 2 |
cardiocyte | 7.53e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 6.12e-23 | 2 |
umbilical artery | 2.92e-12 | 4 |
right ovary | 6.51e-10 | 5 |
female gonad | 2.55e-08 | 13 |
omentum | 4.04e-08 | 6 |
peritoneum | 4.04e-08 | 6 |
abdominal cavity | 4.04e-08 | 6 |
visceral peritoneum | 4.04e-08 | 6 |
brachiocephalic artery | 7.20e-07 | 2 |
brachiocephalic vasculature | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.97e-13 | 14 |
female reproductive organ cancer | 6.79e-07 | 27 |