FFCP PHASE1:Hg19::chr5:16540745..16540752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:16540745..16540752,+ | |||
|description=CAGE_peak_at_chr5:16540745..16540752,+ | |description=CAGE_peak_at_chr5:16540745..16540752,+ | ||
|id=chr5:16540745..16540752,+ | |id=chr5:16540745..16540752,+ | ||
|ontology_enrichment_celltype=CL:0000569!7.81e-09!4;CL:0000011!7.81e-09!4 | |ontology_enrichment_celltype=CL:0000569!7.81e-09!4;CL:0000011!7.81e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.25e-12;13!CL:0002615;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.01e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.51e-09;2 | |||
|ontology_enrichment_disease=DOID:2394!2.71e-21!14;DOID:120!1.49e-12!27;DOID:193!1.51e-11!29 | |ontology_enrichment_disease=DOID:2394!2.71e-21!14;DOID:120!1.49e-12!27;DOID:193!1.51e-11!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.08e-29;14!DOID:120;1.78e-15;27!DOID:193;2.05e-14;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.58e-30,14;DOID:120,1.68e-15,27;DOID:193,1.94e-14,29 | |||
|ontology_enrichment_uberon=UBERON:0002118!6.03e-20!5;UBERON:0004532!6.03e-20!5;UBERON:0000992!4.22e-14!13;UBERON:0000991!2.51e-08!21;UBERON:0009196!2.51e-08!21;UBERON:0009117!2.51e-08!21;UBERON:0005564!2.51e-08!21;UBERON:0004176!6.70e-08!22;UBERON:0002308!5.73e-07!9;UBERON:0000125!5.73e-07!9;UBERON:0001049!6.70e-07!57;UBERON:0005068!6.70e-07!57;UBERON:0006241!6.70e-07!57;UBERON:0007135!6.70e-07!57;UBERON:0003134!7.33e-07!37;UBERON:0000474!7.33e-07!37 | |ontology_enrichment_uberon=UBERON:0002118!6.03e-20!5;UBERON:0004532!6.03e-20!5;UBERON:0000992!4.22e-14!13;UBERON:0000991!2.51e-08!21;UBERON:0009196!2.51e-08!21;UBERON:0009117!2.51e-08!21;UBERON:0005564!2.51e-08!21;UBERON:0004176!6.70e-08!22;UBERON:0002308!5.73e-07!9;UBERON:0000125!5.73e-07!9;UBERON:0001049!6.70e-07!57;UBERON:0005068!6.70e-07!57;UBERON:0006241!6.70e-07!57;UBERON:0007135!6.70e-07!57;UBERON:0003134!7.33e-07!37;UBERON:0000474!7.33e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.41e-30;5!UBERON:0000992;7.14e-21;13!UBERON:0000991;4.57e-13;21!UBERON:0001897;7.98e-10;2!UBERON:0010225;7.98e-10;2!UBERON:0001873;1.51e-09;2!UBERON:0003134;8.49e-07;33!UBERON:0005383;8.86e-07;3!UBERON:0005382;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.05e-30,5;UBERON:0000992,6.29e-21,13;UBERON:0000991,4.23e-13,21;UBERON:0009196,4.23e-13,21;UBERON:0009117,4.23e-13,21;UBERON:0005564,4.23e-13,21;UBERON:0004176,1.61e-12,22;UBERON:0001897,7.98e-10,2;UBERON:0010225,7.98e-10,2;UBERON:0001873,1.12e-09,2;UBERON:0010122,1.12e-09,2;UBERON:0002323,4.28e-09,46;UBERON:0004458,1.54e-08,49;UBERON:0003886,9.56e-08,54;UBERON:0003134,1.48e-07,37;UBERON:0000474,1.48e-07,37;UBERON:0005383,7.28e-07,3;UBERON:0005382,7.28e-07,3;UBERON:0002553,7.48e-07,61;UBERON:0003100,7.71e-07,41 | |||
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| ||
|short_description=p@chr5:16540745..16540752,+ | |short_description=p@chr5:16540745..16540752,+ | ||
}} | }} |
Latest revision as of 12:39, 30 July 2015
Short description: | p@chr5:16540745..16540752, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:16540745..16540752, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.01e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.05e-30 | 5 |
female gonad | 6.29e-21 | 13 |
gonad | 4.23e-13 | 21 |
indifferent external genitalia | 4.23e-13 | 21 |
indifferent gonad | 4.23e-13 | 21 |
gonad primordium | 4.23e-13 | 21 |
external genitalia | 1.61e-12 | 22 |
dorsal plus ventral thalamus | 7.98e-10 | 2 |
thalamic complex | 7.98e-10 | 2 |
caudate nucleus | 1.12e-09 | 2 |
future caudate nucleus | 1.12e-09 | 2 |
body cavity | 4.28e-09 | 46 |
body cavity or lining | 1.54e-08 | 49 |
body cavity precursor | 9.56e-08 | 54 |
female reproductive organ | 1.48e-07 | 37 |
female reproductive system | 1.48e-07 | 37 |
caudate-putamen | 7.28e-07 | 3 |
dorsal striatum | 7.28e-07 | 3 |
anatomical cavity | 7.48e-07 | 61 |
female organism | 7.71e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.58e-30 | 14 |
female reproductive organ cancer | 1.68e-15 | 27 |
reproductive organ cancer | 1.94e-14 | 29 |