FFCP PHASE1:Hg19::chr5:167182003..167182007,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:167182003..167182007,- | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chr5:167182003..167182007,- | |description=CAGE_peak_at_chr5:167182003..167182007,- | ||
Latest revision as of 12:42, 30 July 2015
| Short description: | p@chr5:167182003..167182007, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr5:167182003..167182007, - |
| Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr5:167182003..167182007- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| corneal epithelial cell | 2.39e-27 | 2 |
| bladder cell | 7.13e-15 | 1 |
| lower urinary tract cell | 7.13e-15 | 1 |
| ectodermal cell | 3.61e-08 | 72 |
| bone matrix secreting cell | 9.19e-08 | 2 |
| osteocyte | 9.19e-08 | 2 |
| osteoclast | 9.19e-08 | 2 |
| squamous epithelial cell | 2.47e-07 | 63 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| urinary bladder urothelium | 7.13e-15 | 1 |
| wall of urinary bladder | 7.13e-15 | 1 |
| mucosa of urinary bladder | 7.13e-15 | 1 |
| cornea | 3.37e-14 | 4 |
| eye surface | 3.37e-14 | 4 |
| optic eminence | 3.37e-14 | 4 |
| corneal primordium | 3.37e-14 | 4 |
| sense organ | 3.86e-09 | 24 |
| sensory system | 3.86e-09 | 24 |
| entire sense organ system | 3.86e-09 | 24 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| organ system benign neoplasm | 3.15e-14 | 1 |
| skin benign neoplasm | 3.15e-14 | 1 |
| integumentary system benign neoplasm | 3.15e-14 | 1 |
| dermis tumor | 3.15e-14 | 1 |
| cutaneous fibrous histiocytoma | 3.15e-14 | 1 |
| squamous cell carcinoma | 2.99e-09 | 14 |
| mixed cell type cancer | 4.09e-08 | 2 |
| carcinosarcoma | 4.09e-08 | 2 |
| giant cell tumor | 9.19e-08 | 2 |
| bone giant cell tumor | 9.19e-08 | 2 |
Showing 1 to 10 of 10 entries
