FFCP PHASE1:Hg19::chr5:171498342..171498346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:171498342..171498346,- | |||
|description=CAGE_peak_at_chr5:171498342..171498346,- | |description=CAGE_peak_at_chr5:171498342..171498346,- | ||
|id=chr5:171498342..171498346,- | |id=chr5:171498342..171498346,- | ||
|ontology_enrichment_celltype=CL:0002087!4.67e-24!119;CL:0002057!2.64e-23!42;CL:0000738!2.76e-23!140;CL:0000860!5.14e-22!45;CL:0000037!5.83e-21!172;CL:0000566!5.83e-21!172;CL:0000988!8.31e-20!182;CL:0002194!9.34e-20!63;CL:0000576!9.34e-20!63;CL:0000040!9.34e-20!63;CL:0000559!9.34e-20!63;CL:0002032!2.00e-19!165;CL:0000837!2.00e-19!165;CL:0000766!2.86e-19!76;CL:0002031!4.30e-19!124;CL:0002009!1.08e-18!65;CL:0000839!3.65e-17!70;CL:0000557!1.02e-16!71;CL:0000763!4.86e-15!112;CL:0000049!4.86e-15!112;CL:0002393!3.02e-10!9;CL:0002397!3.02e-10!9 | |ontology_enrichment_celltype=CL:0002087!4.67e-24!119;CL:0002057!2.64e-23!42;CL:0000738!2.76e-23!140;CL:0000860!5.14e-22!45;CL:0000037!5.83e-21!172;CL:0000566!5.83e-21!172;CL:0000988!8.31e-20!182;CL:0002194!9.34e-20!63;CL:0000576!9.34e-20!63;CL:0000040!9.34e-20!63;CL:0000559!9.34e-20!63;CL:0002032!2.00e-19!165;CL:0000837!2.00e-19!165;CL:0000766!2.86e-19!76;CL:0002031!4.30e-19!124;CL:0002009!1.08e-18!65;CL:0000839!3.65e-17!70;CL:0000557!1.02e-16!71;CL:0000763!4.86e-15!112;CL:0000049!4.86e-15!112;CL:0002393!3.02e-10!9;CL:0002397!3.02e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.77e-20;6!CL:0002397;1.77e-20;6!CL:0000511;1.05e-08;1!CL:0002625;1.05e-08;1!CL:0000216;1.05e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.01e-13,9;CL:0002397,1.01e-13,9;CL:0000860,2.49e-10,42;CL:0002057,2.49e-10,42;CL:0000511,6.65e-09,1;CL:0002625,6.65e-09,1;CL:0000216,6.65e-09,1;CL:0000473,6.67e-09,48;CL:0000234,6.67e-09,48;CL:0000766,1.12e-08,72;CL:0000763,9.53e-08,108;CL:0000049,9.53e-08,108;CL:0000037,4.21e-07,168;CL:0002194,6.67e-07,59;CL:0000576,6.67e-07,59;CL:0000040,6.67e-07,59;CL:0000559,6.67e-07,59;CL:0000738,7.64e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.53e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.69e-21!102;UBERON:0003061!1.69e-21!102;UBERON:0002193!1.25e-20!112;UBERON:0002371!3.07e-13!80;UBERON:0001474!4.45e-12!86;UBERON:0002405!1.64e-11!115;UBERON:0004765!5.48e-09!101;UBERON:0001434!5.48e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!1.69e-21!102;UBERON:0003061!1.69e-21!102;UBERON:0002193!1.25e-20!112;UBERON:0002371!3.07e-13!80;UBERON:0001474!4.45e-12!86;UBERON:0002405!1.64e-11!115;UBERON:0004765!5.48e-09!101;UBERON:0001434!5.48e-09!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.05e-08;1!UBERON:0001343;1.05e-08;1!UBERON:0004910;1.05e-08;1!UBERON:0004813;1.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.65e-09,1;UBERON:0001343,6.65e-09,1;UBERON:0004910,6.65e-09,1;UBERON:0005154,6.65e-09,1;UBERON:0005295,6.65e-09,1;UBERON:0004813,6.65e-09,1;UBERON:0005297,6.65e-09,1;UBERON:0005294,6.65e-09,1;UBERON:0010141,6.65e-09,1;UBERON:0005891,6.65e-09,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0,0.232401601740905,0,0,3.32397245119126,4.01088894940283,1.95309783644267,0.223915474239924,0,0.257575567634187,0,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,1.37898272294647,1.29096936716765,0,0.564727018627814,0,0,0.612167784741805,0,0.639337125799041,0,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,1.86846674698672,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,1.10483290796269,0,0.633765858935825,0.425208599930087,1.04829322754188,0.561643155732475,0.300353785683013,0.32145117339416,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0,0,3.89653456815823,0.334231370655521,0,0.221533894583621,1.08321545506006,1.28091319725675,1.69077151827842,0.493313713811028,2.21080014228679,0.869409257205157,0.296573126324121,0.802622484269139,1.04535523804977,0.339928028092699,0.383220493601921,0,0.759059076058509,1.59282707162048,0,0,0.150575119077773,0,1.24930726552346,0.710331756132051,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,1.62028389576352,0.17859945656816,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.646882724578552,0.641715181398742,0.254094624222463,0,0,0,0,2.24702107184155,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,1.07857100409308,0.320182673410333,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0,1.1974762285969,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,1.27753871307098,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,1.21637185924347,0.295547618953547,0,0,0.139423744278603,0.384751292518985,0,0.46112780877612,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0,0,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0.126831620387814,1.09394961803644,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0.281951753939561,0.193373663920732,0.499705779624645,0,0.35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| ||
|short_description=p@chr5:171498342..171498346,- | |short_description=p@chr5:171498342..171498346,- | ||
}} | }} |
Latest revision as of 13:01, 30 July 2015
Short description: | p@chr5:171498342..171498346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:171498342..171498346, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.01e-13 | 9 |
CD14-positive, CD16-positive monocyte | 1.01e-13 | 9 |
classical monocyte | 2.49e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.49e-10 | 42 |
androgen binding protein secreting cell | 6.65e-09 | 1 |
seminiferous tubule epithelial cell | 6.65e-09 | 1 |
Sertoli cell | 6.65e-09 | 1 |
defensive cell | 6.67e-09 | 48 |
phagocyte | 6.67e-09 | 48 |
myeloid leukocyte | 1.12e-08 | 72 |
myeloid cell | 9.53e-08 | 108 |
common myeloid progenitor | 9.53e-08 | 108 |
hematopoietic stem cell | 4.21e-07 | 168 |
monopoietic cell | 6.67e-07 | 59 |
monocyte | 6.67e-07 | 59 |
monoblast | 6.67e-07 | 59 |
promonocyte | 6.67e-07 | 59 |
leukocyte | 7.64e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.65e-09 | 1 |
seminiferous tubule of testis | 6.65e-09 | 1 |
epithelium of male gonad | 6.65e-09 | 1 |
epithelial cord | 6.65e-09 | 1 |
sex cord | 6.65e-09 | 1 |
seminiferous tubule epithelium | 6.65e-09 | 1 |
testis sex cord | 6.65e-09 | 1 |
genital ridge | 6.65e-09 | 1 |
primitive sex cord of indifferent gonad | 6.65e-09 | 1 |
coelomic epithelium | 6.65e-09 | 1 |