FFCP PHASE1:Hg19::chr5:33794904..33794916,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:33794904..33794916,-
|short_description=p@chr5:33794904..33794916,-
|description=CAGE_peak_at_chr5:33794904..33794916,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:33794904..33794916,- | |||
|coexpression_cluster_id=C4494 | |||
|description=CAGE_peak_at_chr5:33794904..33794916,- | |||
|id=chr5:33794904..33794916,- | |||
|ontology_enrichment_celltype=CL:0002620!1.75e-32!23;CL:0000057!2.05e-26!75;CL:0000055!3.71e-21!180;CL:0002551!2.12e-15!6;CL:0002570!5.56e-14!8;CL:0000048!6.51e-09!430;CL:0000723!1.45e-08!436;CL:0000034!4.05e-08!444;CL:0000219!5.41e-08!390;CL:0002320!1.72e-07!365;CL:0000134!2.12e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002551;3.93e-33;6!CL:0002620;4.73e-16;23!CL:0002573;7.90e-12;2!CL:0000057;1.75e-10;73!CL:0002570;3.50e-09;8!CL:0002574;6.72e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,3.46e-33,6;CL:0002620,5.38e-16,23;CL:0000057,1.46e-12,76;CL:0002573,7.91e-12,2;CL:0002570,4.71e-09,8;CL:0002574,5.75e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.17e-08!5;DOID:450!9.17e-08!5;DOID:66!9.17e-08!5;DOID:423!9.17e-08!5;DOID:0080000!9.17e-08!5;DOID:11722!9.17e-08!5;DOID:2394!7.63e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060085;6.72e-09;1!DOID:3165;6.72e-09;1!DOID:0060121;6.72e-09;1!DOID:2438;6.72e-09;1!DOID:4418;6.72e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.54e-09,1;DOID:3165,4.54e-09,1;DOID:0060121,4.54e-09,1;DOID:2438,4.54e-09,1;DOID:4418,4.54e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.81e-26!45;UBERON:0002416!1.81e-26!45;UBERON:0002097!6.20e-23!40;UBERON:0003102!1.41e-16!95;UBERON:0001013!4.01e-12!14;UBERON:0002067!6.08e-10!9;UBERON:0004016!6.08e-10!9;UBERON:0010083!6.08e-10!9;UBERON:0002384!6.17e-08!375;UBERON:0002118!2.10e-07!5;UBERON:0004532!2.10e-07!5;UBERON:0000475!4.31e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;4.56e-22;9!UBERON:0003102;1.80e-13;50!UBERON:0002199;1.48e-11;46!UBERON:0002416;1.48e-11;46!UBERON:0001280;4.89e-11;3!UBERON:0004647;4.89e-11;3!UBERON:0002097;1.48e-10;41!UBERON:0001013;6.36e-09;14!UBERON:0001282;6.72e-09;1!UBERON:0009842;6.72e-09;1!UBERON:0003704;6.72e-09;1!UBERON:0001171;6.72e-09;1!UBERON:0001172;6.72e-09;1!UBERON:0002072;5.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,4.19e-22,9;UBERON:0004016,4.19e-22,9;UBERON:0010083,4.19e-22,9;UBERON:0002199,1.29e-18,46;UBERON:0002416,1.29e-18,46;UBERON:0002097,3.93e-14,41;UBERON:0003102,9.19e-13,99;UBERON:0001280,2.51e-11,3;UBERON:0004647,2.51e-11,3;UBERON:0005171,2.51e-11,3;UBERON:0001282,3.88e-09,1;UBERON:0009842,3.88e-09,1;UBERON:0003704,3.88e-09,1;UBERON:0001171,3.88e-09,1;UBERON:0001172,3.88e-09,1;UBERON:0001013,7.76e-09,14;UBERON:0002072,5.00e-07,5 | |||
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| ||
|short_description=p@chr5:33794904..33794916,- | |||
}} | }} |
Latest revision as of 14:25, 30 July 2015
Short description: | p@chr5:33794904..33794916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:33794904..33794916, - |
Coexpression cluster: | C4494_schwannoma_Fibroblast_Mesenchymal_giant_Keratocytes_Sebocyte_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 3.46e-33 | 6 |
skin fibroblast | 5.38e-16 | 23 |
fibroblast | 1.46e-12 | 76 |
Schwann cell | 7.91e-12 | 2 |
mesenchymal stem cell of adipose | 4.71e-09 | 8 |
stromal cell of pancreas | 5.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
dermis | 4.19e-22 | 9 |
dermatome | 4.19e-22 | 9 |
future dermis | 4.19e-22 | 9 |
integument | 1.29e-18 | 46 |
integumental system | 1.29e-18 | 46 |
skin of body | 3.93e-14 | 41 |
surface structure | 9.19e-13 | 99 |
liver parenchyma | 2.51e-11 | 3 |
liver lobule | 2.51e-11 | 3 |
hepatic duct | 2.51e-11 | 3 |
intralobular bile duct | 3.88e-09 | 1 |
acinus | 3.88e-09 | 1 |
intrahepatic bile duct | 3.88e-09 | 1 |
portal lobule | 3.88e-09 | 1 |
hepatic acinus | 3.88e-09 | 1 |
adipose tissue | 7.76e-09 | 14 |
hypodermis | 5.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.54e-09 | 1 |
skin benign neoplasm | 4.54e-09 | 1 |
integumentary system benign neoplasm | 4.54e-09 | 1 |
dermis tumor | 4.54e-09 | 1 |
cutaneous fibrous histiocytoma | 4.54e-09 | 1 |