FFCP PHASE1:Hg19::chr5:43019699..43019711,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:43019699..43019711,- | |||
|coexpression_cluster_id=C2817 | |||
|description=CAGE_peak_at_chr5:43019699..43019711,- | |description=CAGE_peak_at_chr5:43019699..43019711,- | ||
|id=chr5:43019699..43019711,- | |id=chr5:43019699..43019711,- | ||
|ontology_enrichment_celltype=CL:0000738!1.93e-49!140;CL:0000037!4.90e-46!172;CL:0000566!4.90e-46!172;CL:0002031!6.40e-46!124;CL:0002087!7.27e-46!119;CL:0000988!1.54e-44!182;CL:0000838!7.71e-44!52;CL:0000542!9.99e-43!53;CL:0000051!9.99e-43!53;CL:0002032!2.89e-40!165;CL:0000837!2.89e-40!165;CL:0000084!2.94e-20!25;CL:0000827!2.94e-20!25;CL:0000945!5.96e-20!24;CL:0000826!5.96e-20!24;CL:0000791!3.48e-18!18;CL:0000789!3.48e-18!18;CL:0002420!3.48e-18!18;CL:0002419!3.48e-18!18;CL:0000790!3.48e-18!18;CL:0000236!2.71e-17!14;CL:0000625!2.03e-14!11;CL:0002057!2.04e-13!42;CL:0000860!3.53e-13!45;CL:0000134!1.28e-10!358;CL:0002320!5.49e-10!365;CL:0000839!9.78e-10!70;CL:0000766!1.70e-09!76;CL:0000763!3.83e-09!112;CL:0000049!3.83e-09!112;CL:0000557!1.23e-08!71;CL:0002009!2.60e-08!65;CL:0000219!3.43e-08!390;CL:0002194!5.40e-08!63;CL:0000576!5.40e-08!63;CL:0000040!5.40e-08!63;CL:0000559!5.40e-08!63;CL:0002393!4.43e-07!9;CL:0002397!4.43e-07!9;CL:0000624!8.20e-07!6 | |ontology_enrichment_celltype=CL:0000738!1.93e-49!140;CL:0000037!4.90e-46!172;CL:0000566!4.90e-46!172;CL:0002031!6.40e-46!124;CL:0002087!7.27e-46!119;CL:0000988!1.54e-44!182;CL:0000838!7.71e-44!52;CL:0000542!9.99e-43!53;CL:0000051!9.99e-43!53;CL:0002032!2.89e-40!165;CL:0000837!2.89e-40!165;CL:0000084!2.94e-20!25;CL:0000827!2.94e-20!25;CL:0000945!5.96e-20!24;CL:0000826!5.96e-20!24;CL:0000791!3.48e-18!18;CL:0000789!3.48e-18!18;CL:0002420!3.48e-18!18;CL:0002419!3.48e-18!18;CL:0000790!3.48e-18!18;CL:0000236!2.71e-17!14;CL:0000625!2.03e-14!11;CL:0002057!2.04e-13!42;CL:0000860!3.53e-13!45;CL:0000134!1.28e-10!358;CL:0002320!5.49e-10!365;CL:0000839!9.78e-10!70;CL:0000766!1.70e-09!76;CL:0000763!3.83e-09!112;CL:0000049!3.83e-09!112;CL:0000557!1.23e-08!71;CL:0002009!2.60e-08!65;CL:0000219!3.43e-08!390;CL:0002194!5.40e-08!63;CL:0000576!5.40e-08!63;CL:0000040!5.40e-08!63;CL:0000559!5.40e-08!63;CL:0002393!4.43e-07!9;CL:0002397!4.43e-07!9;CL:0000624!8.20e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.37e-34;11!CL:0000791;8.85e-31;18!CL:0000789;8.85e-31;18!CL:0002419;8.85e-31;18!CL:0000542;1.44e-27;53!CL:0000236;5.68e-23;13!CL:0000084;1.54e-21;25!CL:0000623;7.87e-16;3!CL:0000945;5.42e-15;24!CL:0000767;9.71e-08;3!CL:0000898;1.05e-07;3!CL:0000738;2.41e-07;136!CL:0002087;6.14e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.07e-45,52;CL:0000542,5.41e-44,53;CL:0000051,5.41e-44,53;CL:0000625,2.16e-34,11;CL:0000791,7.68e-31,18;CL:0000789,7.68e-31,18;CL:0002420,7.68e-31,18;CL:0002419,7.68e-31,18;CL:0000790,7.68e-31,18;CL:0000738,1.52e-29,136;CL:0002087,1.03e-26,115;CL:0002031,2.26e-23,120;CL:0000037,1.23e-22,168;CL:0000084,1.39e-21,25;CL:0000827,1.39e-21,25;CL:0000236,1.69e-21,14;CL:0000988,3.84e-21,177;CL:0002032,5.28e-19,161;CL:0000837,5.28e-19,161;CL:0000623,5.71e-16,3;CL:0000825,5.71e-16,3;CL:0000945,3.98e-15,24;CL:0000826,3.98e-15,24;CL:0000898,9.72e-08,3;CL:0000767,1.18e-07,3;CL:0000134,3.62e-07,354;CL:0002320,6.74e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;8.85e-31;18!CL:0000051;1.44e-27;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.17e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.83e-15!102;UBERON:0003061!2.83e-15!102;UBERON:0002193!8.21e-13!112;UBERON:0002384!3.92e-09!375;UBERON:0002371!1.99e-08!80;UBERON:0001474!6.61e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr5:43019699..43019711,- | |short_description=p@chr5:43019699..43019711,- | ||
}} | }} |
Latest revision as of 14:57, 30 July 2015
Short description: | p@chr5:43019699..43019711, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:43019699..43019711, - |
Coexpression cluster: | C2817_Natural_CD8_CD4_CD34_Basophils_thymus_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.07e-45 | 52 |
lymphocyte | 5.41e-44 | 53 |
common lymphoid progenitor | 5.41e-44 | 53 |
CD8-positive, alpha-beta T cell | 2.16e-34 | 11 |
mature alpha-beta T cell | 7.68e-31 | 18 |
alpha-beta T cell | 7.68e-31 | 18 |
immature T cell | 7.68e-31 | 18 |
mature T cell | 7.68e-31 | 18 |
immature alpha-beta T cell | 7.68e-31 | 18 |
leukocyte | 1.52e-29 | 136 |
nongranular leukocyte | 1.03e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-23 | 120 |
hematopoietic stem cell | 1.23e-22 | 168 |
T cell | 1.39e-21 | 25 |
pro-T cell | 1.39e-21 | 25 |
B cell | 1.69e-21 | 14 |
hematopoietic cell | 3.84e-21 | 177 |
hematopoietic oligopotent progenitor cell | 5.28e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.28e-19 | 161 |
natural killer cell | 5.71e-16 | 3 |
pro-NK cell | 5.71e-16 | 3 |
lymphocyte of B lineage | 3.98e-15 | 24 |
pro-B cell | 3.98e-15 | 24 |
naive T cell | 9.72e-08 | 3 |
basophil | 1.18e-07 | 3 |
mesenchymal cell | 3.62e-07 | 354 |
connective tissue cell | 6.74e-07 | 361 |