FFCP PHASE1:Hg19::chr5:52660072..52660094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:52660072..52660094,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr5:52660072..52660094,- | |description=CAGE_peak_at_chr5:52660072..52660094,- | ||
|id=chr5:52660072..52660094,- | |id=chr5:52660072..52660094,- | ||
|ontology_enrichment_celltype=CL:0000057!4.12e-27!75;CL:0000055!9.96e-24!180;CL:0002620!5.32e-15!23;CL:0000359!5.32e-11!32;CL:0002371!6.33e-11!591;CL:0000680!3.22e-10!57;CL:0000056!3.22e-10!57;CL:0000355!3.22e-10!57;CL:0000187!8.31e-10!54;CL:0000144!8.99e-10!625;CL:0000723!1.08e-09!436;CL:0000393!1.70e-09!60;CL:0000211!1.70e-09!60;CL:0000034!3.36e-09!444;CL:0002556!4.73e-09!6;CL:0000048!6.49e-09!430;CL:0000192!1.17e-08!42;CL:0000514!1.17e-08!42;CL:0000183!1.43e-08!59;CL:0000548!2.25e-08!679;CL:0000004!2.25e-08!679;CL:0000255!2.25e-08!679;CL:0000012!3.07e-08!682;CL:0002621!4.96e-08!3;CL:0002494!2.00e-07!16;CL:0002166!5.75e-07!3 | |ontology_enrichment_celltype=CL:0000057!4.12e-27!75;CL:0000055!9.96e-24!180;CL:0002620!5.32e-15!23;CL:0000359!5.32e-11!32;CL:0002371!6.33e-11!591;CL:0000680!3.22e-10!57;CL:0000056!3.22e-10!57;CL:0000355!3.22e-10!57;CL:0000187!8.31e-10!54;CL:0000144!8.99e-10!625;CL:0000723!1.08e-09!436;CL:0000393!1.70e-09!60;CL:0000211!1.70e-09!60;CL:0000034!3.36e-09!444;CL:0002556!4.73e-09!6;CL:0000048!6.49e-09!430;CL:0000192!1.17e-08!42;CL:0000514!1.17e-08!42;CL:0000183!1.43e-08!59;CL:0000548!2.25e-08!679;CL:0000004!2.25e-08!679;CL:0000255!2.25e-08!679;CL:0000012!3.07e-08!682;CL:0002621!4.96e-08!3;CL:0002494!2.00e-07!16;CL:0002166!5.75e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.49e-15;4!CL:0002547;1.49e-15;4!CL:0002591;1.78e-15;1!CL:0002539;1.86e-13;10!CL:0002262;2.15e-08;2!CL:0002554;2.15e-08;2!CL:1000398;2.15e-08;2!CL:0002570;5.18e-08;8!CL:0000359;2.94e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.55e-15,4;CL:0002547,1.55e-15,4;CL:0002591,2.06e-15,1;CL:0002539,1.90e-13,10;CL:0002554,1.61e-08,2;CL:0002262,1.86e-08,2;CL:1000398,1.86e-08,2;CL:0002570,6.86e-08,8;CL:0000359,2.23e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.15e-08;2!UBERON:0010056;2.15e-08;2 | |||
|ontology_enrichment_disease=DOID:17!1.98e-10!5;DOID:450!1.98e-10!5;DOID:66!1.98e-10!5;DOID:423!1.98e-10!5;DOID:0080000!1.98e-10!5;DOID:11722!1.98e-10!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr5:52660072..52660094,- | |short_description=p@chr5:52660072..52660094,- | ||
}} | }} |
Latest revision as of 15:11, 30 July 2015
Short description: | p@chr5:52660072..52660094, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:52660072..52660094, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.55e-15 | 4 |
fibroblast of the aortic adventitia | 1.55e-15 | 4 |
smooth muscle cell of the pulmonary artery | 2.06e-15 | 1 |
aortic smooth muscle cell | 1.90e-13 | 10 |
fibroblast of lymphatic vessel | 1.61e-08 | 2 |
endothelial cell of sinusoid | 1.86e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.86e-08 | 2 |
mesenchymal stem cell of adipose | 6.86e-08 | 8 |
vascular associated smooth muscle cell | 2.23e-07 | 32 |