FFCP PHASE1:Hg19::chr5:61213098..61213119,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:61213098..61213119,-
|short_description=p@chr5:61213098..61213119,-
|description=CAGE_peak_at_chr5:61213098..61213119,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:61213098..61213119,- | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr5:61213098..61213119,- | |||
|id=chr5:61213098..61213119,- | |||
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|ontology_enrichment_development_v019=CL:0000357;1.12e-10;6!CL:0000114;1.12e-10;6!CL:0000223;8.52e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr5:61213098..61213119,- | |||
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Latest revision as of 15:38, 30 July 2015
Short description: | p@chr5:61213098..61213119, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:61213098..61213119, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.40e-29 | 14 |
transitional epithelial cell | 1.32e-28 | 4 |
urothelial cell | 1.32e-28 | 4 |
respiratory epithelial cell | 1.75e-24 | 13 |
epithelial cell of Malassez | 3.61e-21 | 3 |
epidermal cell | 2.26e-18 | 9 |
epithelial cell | 1.75e-17 | 253 |
ecto-epithelial cell | 1.71e-14 | 34 |
sebum secreting cell | 4.32e-14 | 2 |
epithelial cell of sweat gland | 4.32e-14 | 2 |
epithelial cell of skin gland | 4.32e-14 | 2 |
acinar cell of sebaceous gland | 4.32e-14 | 2 |
endo-epithelial cell | 4.74e-14 | 42 |
keratinocyte | 9.78e-13 | 5 |
epithelial cell of tracheobronchial tree | 6.56e-12 | 9 |
epithelial cell of lower respiratory tract | 6.56e-12 | 9 |
stratified squamous epithelial cell | 1.07e-10 | 6 |
keratin accumulating cell | 1.07e-10 | 6 |
stratified epithelial cell | 1.07e-10 | 6 |
keratinizing barrier epithelial cell | 1.07e-10 | 6 |
epithelial fate stem cell | 1.07e-10 | 6 |
stratified epithelial stem cell | 1.07e-10 | 6 |
surface ectodermal cell | 1.07e-10 | 6 |
bronchial epithelial cell | 9.81e-10 | 3 |
endodermal cell | 1.03e-09 | 58 |
gingival epithelial cell | 1.66e-09 | 3 |
mammary gland epithelial cell | 6.65e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.21e-23 | 5 |
transitional epithelium | 3.80e-19 | 6 |
jaw skeleton | 5.03e-16 | 4 |
splanchnocranium | 5.03e-16 | 4 |
skin gland | 4.32e-14 | 2 |
epidermis gland | 4.32e-14 | 2 |
gland of integumental system | 4.32e-14 | 2 |
sebaceous gland | 4.32e-14 | 2 |
skin sebaceous gland | 4.32e-14 | 2 |
sweat gland | 4.32e-14 | 2 |
sweat gland placode | 4.32e-14 | 2 |
sebaceous gland placode | 4.32e-14 | 2 |
primary subdivision of cranial skeletal system | 6.28e-13 | 5 |
skin epidermis | 5.85e-11 | 15 |
outer epithelium | 5.85e-11 | 15 |
enveloping layer of ectoderm | 5.85e-11 | 15 |
protuberance | 7.39e-11 | 6 |
pharyngeal arch | 7.39e-11 | 6 |
embryonic head | 7.39e-11 | 6 |
lower respiratory tract epithelium | 9.81e-10 | 3 |
epithelium of bronchus | 9.81e-10 | 3 |
gingival epithelium | 1.66e-09 | 3 |
urinary system structure | 4.12e-08 | 47 |
renal system | 6.43e-08 | 48 |
mammary gland | 6.65e-08 | 4 |
mammary bud | 6.65e-08 | 4 |
mammary ridge | 6.65e-08 | 4 |
mammary placode | 6.65e-08 | 4 |
tracheobronchial tree | 3.38e-07 | 15 |
lower respiratory tract | 3.38e-07 | 15 |