FFCP PHASE1:Hg19::chr5:72509751..72509785,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000513379,ENST00000515556_5end | |||
|cluster_id=chr5:72509751..72509785,+ | |||
|coexpression_cluster_id=C472 | |||
|description=CAGE_peak_1_at_ENST00000513379_5end,CAGE_peak_1_at_ENST00000515556_5end | |||
|id=chr5:72509751..72509785,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.08e-18;2!UBERON:0005754;4.46e-10;1!UBERON:0004874;1.76e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;9.70e-10;1!DOID:0070004;9.70e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.06e-09,1;DOID:0070004,1.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-19!115;UBERON:0000349!7.22e-11!5;UBERON:0002346!1.08e-09!90;UBERON:0001893!1.67e-09!34;UBERON:0003056!2.33e-09!61;UBERON:0002791!1.21e-08!33;UBERON:0000153!5.31e-08!129;UBERON:0007811!5.31e-08!129;UBERON:0003075!6.33e-08!86;UBERON:0007284!6.33e-08!86;UBERON:0001869!1.00e-07!32;UBERON:0003135!1.03e-07!11;UBERON:0002619!1.06e-07!22;UBERON:0000488!1.69e-07!4;UBERON:0006947!2.48e-07!3;UBERON:0004054!2.48e-07!3;UBERON:0002780!2.99e-07!41;UBERON:0001890!2.99e-07!41;UBERON:0006240!2.99e-07!41;UBERON:0002020!3.60e-07!34;UBERON:0003528!3.60e-07!34;UBERON:0000073!4.06e-07!94;UBERON:0001016!4.06e-07!94;UBERON:0003080!5.42e-07!42;UBERON:0000475!6.60e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;7.13e-28;5!UBERON:0006947;4.65e-26;3!UBERON:0004054;4.65e-26;3!UBERON:0005904;1.04e-19;4!UBERON:0001876;2.34e-18;2!UBERON:0001954;3.16e-18;2!UBERON:0003022;3.16e-18;2!UBERON:0002421;3.16e-18;2!UBERON:0002600;3.16e-18;2!UBERON:0000341;3.10e-17;2!UBERON:0003135;1.90e-12;11!UBERON:0000998;4.46e-10;1!UBERON:0006868;4.46e-10;1!UBERON:0001000;5.08e-10;1!UBERON:0005352;5.08e-10;1!UBERON:0004175;5.64e-10;21!UBERON:0002022;1.76e-09;1!UBERON:0000989;1.76e-09;1!UBERON:0001301;1.76e-09;1!UBERON:0008811;1.76e-09;1!UBERON:0002619;3.82e-09;22!UBERON:0000058;3.34e-08;10!UBERON:0000956;4.58e-08;25!UBERON:0000203;4.58e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,6.90e-28,5;UBERON:0006947,3.45e-26,3;UBERON:0004054,3.45e-26,3;UBERON:0005904,8.33e-20,4;UBERON:0001876,2.24e-18,2;UBERON:0001954,3.16e-18,2;UBERON:0003022,3.16e-18,2;UBERON:0002421,3.16e-18,2;UBERON:0002600,3.16e-18,2;UBERON:0000341,5.10e-17,2;UBERON:0003135,1.67e-12,11;UBERON:0007023,3.56e-10,114;UBERON:0000998,4.46e-10,1;UBERON:0006868,4.46e-10,1;UBERON:0001000,5.31e-10,1;UBERON:0005352,5.31e-10,1;UBERON:0001301,1.25e-09,1;UBERON:0000989,1.62e-09,1;UBERON:0008811,1.62e-09,1;UBERON:0006258,1.62e-09,1;UBERON:0005876,1.62e-09,1;UBERON:0004874,1.62e-09,1;UBERON:0002022,1.76e-09,1;UBERON:0002619,3.79e-09,22;UBERON:0004175,2.26e-08,25;UBERON:0000956,4.54e-08,25;UBERON:0000203,4.54e-08,25;UBERON:0004876,2.09e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,1.58102614247627,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.587172493218824,0,0.140450806702248,0,0,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.7366441494834,5.90811548924153,0,0,0,0.398495976502139,0,0,0,0,0,0.359473404589307,0,0,0.986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0,0,0,0,8.68085686268659,0,0,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,4.16543372004314,0,0,1.57254001417827,0,0,0,0,0.484945082442097,0,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0.857974989309823,0.14405479798815,0.372757606696298,0,0.815425236441684,0.941425616810999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,8.74752658790234,5.31193283835145,0,0,0,0,0.77380195455795,1.45798935979259,0,0.630445658393585,0.0524545881349981,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0,0,17.785046870815,0.121792598380896,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2720846135555,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.743614585554013,0,0,0,0,0,0,0.449604575675217,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,1.48863353516788,0.351742488719241,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0,0,0.39246546425257,0,0,3.65263488203798,0,0,4.21711610642272,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0.170426809518315,10.1612892045823,0,0,0,0,0,0.487671699929078,0,0.205325613712494,1.1598144313382,0.485710993059139,4.44484980578001,0,0,0,0,3.32118255846682,0,0.218559560503957,0,0.490296643507811,0,1.57046773691956,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.339957450954573,0,0.5290268405154,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,0.0757786982182394,0,0,0,1.0661699095049,1.1903221573187,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,1.52401723527873,0,0,0.502055437748735,0.332660356546013,0,0.106727345877715,0,0,0,0,0.813792356631477,0,0.603821380773079,0 | |||
|short_description=p1@ENST00000513379,p1@ENST00000515556 | |||
}} |
Latest revision as of 16:13, 30 July 2015
Short description: | p1@ENST00000513379, p1@ENST00000515556 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000513379_5end, CAGE_peak_1_at_ENST00000515556_5end |
Coexpression cluster: | C472_amygdala_medial_hippocampus_insula_frontal_temporal_paracentral |
Association with transcript: | 0bp_to_ENST00000513379, ENST00000515556_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
limbic system | 6.90e-28 | 5 |
male genital duct | 3.45e-26 | 3 |
internal male genitalia | 3.45e-26 | 3 |
duct of male reproductive system | 8.33e-20 | 4 |
amygdala | 2.24e-18 | 2 |
Ammon's horn | 3.16e-18 | 2 |
lobe parts of cerebral cortex | 3.16e-18 | 2 |
hippocampal formation | 3.16e-18 | 2 |
limbic lobe | 3.16e-18 | 2 |
throat | 5.10e-17 | 2 |
male reproductive organ | 1.67e-12 | 11 |
adult organism | 3.56e-10 | 114 |
seminal vesicle | 4.46e-10 | 1 |
seminal fluid secreting gland | 4.46e-10 | 1 |
vas deferens | 5.31e-10 | 1 |
spermatic cord | 5.31e-10 | 1 |
epididymis | 1.25e-09 | 1 |
penis | 1.62e-09 | 1 |
intromittent organ | 1.62e-09 | 1 |
lateral plate mesenchyme | 1.62e-09 | 1 |
undifferentiated genital tubercle | 1.62e-09 | 1 |
somatopleure | 1.62e-09 | 1 |
insula | 1.76e-09 | 1 |
regional part of cerebral cortex | 3.79e-09 | 22 |
internal genitalia | 2.26e-08 | 25 |
cerebral cortex | 4.54e-08 | 25 |
pallium | 4.54e-08 | 25 |
urogenital ridge | 2.09e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.06e-09 | 1 |
myeloma | 1.06e-09 | 1 |