FFCP PHASE1:Hg19::chr6:30905248..30905256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:30905248..30905256,- | |||
|coexpression_cluster_id=C308 | |coexpression_cluster_id=C308 | ||
|description=CAGE_peak_at_chr6:30905248..30905256,- | |description=CAGE_peak_at_chr6:30905248..30905256,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.44e-08;29!UBERON:0001041;1.10e-07;30 | |ontology_enrichment_development_v019=UBERON:0008947;6.44e-08;29!UBERON:0001041;1.10e-07;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!9.99e-30!1;UBERON:0006518!9.99e-30!1;UBERON:0008949!9.99e-30!1;UBERON:0000101!9.99e-30!1;UBERON:0002167!9.99e-30!1;UBERON:0005178!8.03e-14!34;UBERON:0002224!8.03e-14!34;UBERON:0005181!1.92e-13!35;UBERON:0002048!2.35e-12!22;UBERON:0000117!2.35e-12!22;UBERON:0000171!2.35e-12!22;UBERON:0000170!2.35e-12!22;UBERON:0005597!2.35e-12!22;UBERON:0000118!2.35e-12!22;UBERON:0000915!3.30e-09!52;UBERON:0001043!2.61e-08!4;UBERON:0009143!2.61e-08!4;UBERON:0005153!1.27e-07!37;UBERON:0008947!1.95e-07!38;UBERON:0003258!1.95e-07!38 | |ontology_enrichment_uberon=UBERON:0002171!9.99e-30!1;UBERON:0006518!9.99e-30!1;UBERON:0008949!9.99e-30!1;UBERON:0000101!9.99e-30!1;UBERON:0002167!9.99e-30!1;UBERON:0005178!8.03e-14!34;UBERON:0002224!8.03e-14!34;UBERON:0005181!1.92e-13!35;UBERON:0002048!2.35e-12!22;UBERON:0000117!2.35e-12!22;UBERON:0000171!2.35e-12!22;UBERON:0000170!2.35e-12!22;UBERON:0005597!2.35e-12!22;UBERON:0000118!2.35e-12!22;UBERON:0000915!3.30e-09!52;UBERON:0001043!2.61e-08!4;UBERON:0009143!2.61e-08!4;UBERON:0005153!1.27e-07!37;UBERON:0008947!1.95e-07!38;UBERON:0003258!1.95e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.42e-50;1!UBERON:0006518;2.42e-50;1!UBERON:0008949;2.42e-50;1!UBERON:0000101;2.42e-50;1!UBERON:0002167;2.42e-50;1!UBERON:0002048;4.14e-10;22!UBERON:0000117;4.14e-10;22!UBERON:0000171;4.14e-10;22!UBERON:0000170;4.14e-10;22 | |ontology_enrichment_uberon_v019=UBERON:0002171;2.42e-50;1!UBERON:0006518;2.42e-50;1!UBERON:0008949;2.42e-50;1!UBERON:0000101;2.42e-50;1!UBERON:0002167;2.42e-50;1!UBERON:0002048;4.14e-10;22!UBERON:0000117;4.14e-10;22!UBERON:0000171;4.14e-10;22!UBERON:0000170;4.14e-10;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.42e-50,1;UBERON:0006518,2.42e-50,1;UBERON:0008949,2.42e-50,1;UBERON:0000101,2.42e-50,1;UBERON:0002167,2.42e-50,1;UBERON:0002048,4.14e-10,22;UBERON:0000117,4.14e-10,22;UBERON:0000171,4.14e-10,22;UBERON:0000170,4.14e-10,22;UBERON:0005597,4.14e-10,22;UBERON:0000118,4.14e-10,22;UBERON:0005178,6.75e-07,34;UBERON:0002224,6.75e-07,34;UBERON:0005181,9.98e-07,35 | |||
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|short_description=p@chr6:30905248..30905256,- | |short_description=p@chr6:30905248..30905256,- | ||
}} | }} |
Latest revision as of 23:47, 30 July 2015
Short description: | p@chr6:30905248..30905256, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:30905248..30905256, - |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.42e-50 | 1 |
right lung lobe | 2.42e-50 | 1 |
lower lobe of lung | 2.42e-50 | 1 |
lobe of lung | 2.42e-50 | 1 |
right lung | 2.42e-50 | 1 |
lung | 4.14e-10 | 22 |
respiratory tube | 4.14e-10 | 22 |
respiration organ | 4.14e-10 | 22 |
pair of lungs | 4.14e-10 | 22 |
lung primordium | 4.14e-10 | 22 |
lung bud | 4.14e-10 | 22 |
thoracic cavity element | 6.75e-07 | 34 |
thoracic cavity | 6.75e-07 | 34 |
thoracic segment organ | 9.98e-07 | 35 |