FFCP PHASE1:Hg19::chr6:33084418..33084441,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:33084418..33084441,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr6:33084418..33084441,+ | |||
|id=chr6:33084418..33084441,+ | |||
|ontology_enrichment_celltype=CL:0002322!9.42e-26!5;CL:0000540!7.21e-14!6;CL:0000031!7.21e-14!6;CL:0000404!7.21e-14!6;CL:0000039!9.65e-12!7;CL:0000586!9.65e-12!7;CL:0000047!2.04e-10!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.27e-71;5!CL:0000039;4.37e-32;7!CL:0000586;4.37e-32;7!CL:0002321;8.15e-24;15!CL:0000540;2.05e-22;6!CL:0000404;2.05e-22;6!CL:0000148;1.71e-13;10!CL:0000147;8.31e-10;14!CL:0000710;5.07e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.66e-71,5;CL:0000039,4.55e-32,7;CL:0000586,4.55e-32,7;CL:0000540,1.97e-22,6;CL:0000031,1.97e-22,6;CL:0000404,1.97e-22,6;CL:0000047,5.37e-17,8;CL:0000148,1.75e-13,10;CL:0000541,1.75e-13,10;CL:0000147,8.44e-10,14;CL:0000133,3.09e-08,59;CL:0000710,5.12e-07,20;CL:0000221,9.94e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.34e-22;10!UBERON:0005564;1.34e-22;10!CL:0000031;2.05e-22;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.86e-10;22!DOID:2994;1.86e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.88e-10,22;DOID:2994,1.88e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002020!3.27e-31!34;UBERON:0003528!3.27e-31!34;UBERON:0001893!5.45e-31!34;UBERON:0001049!5.82e-31!57;UBERON:0005068!5.82e-31!57;UBERON:0006241!5.82e-31!57;UBERON:0007135!5.82e-31!57;UBERON:0005743!9.14e-31!86;UBERON:0001017!8.45e-30!82;UBERON:0002616!9.08e-30!59;UBERON:0001869!4.85e-29!32;UBERON:0002780!9.94e-29!41;UBERON:0001890!9.94e-29!41;UBERON:0006240!9.94e-29!41;UBERON:0002791!4.44e-28!33;UBERON:0003080!5.69e-28!42;UBERON:0000073!2.30e-27!94;UBERON:0001016!2.30e-27!94;UBERON:0000955!2.07e-24!69;UBERON:0006238!2.07e-24!69;UBERON:0003075!3.72e-21!86;UBERON:0007284!3.72e-21!86;UBERON:0001871!5.16e-21!7;UBERON:0001950!8.87e-21!20;UBERON:0003056!1.21e-20!61;UBERON:0002346!5.26e-20!90;UBERON:0002420!5.13e-19!9;UBERON:0007245!5.13e-19!9;UBERON:0010009!5.13e-19!9;UBERON:0010011!5.13e-19!9;UBERON:0000454!5.13e-19!9;UBERON:0002619!8.25e-19!22;UBERON:0002308!9.95e-19!9;UBERON:0000125!9.95e-19!9;UBERON:0000956!2.00e-16!25;UBERON:0000203!2.00e-16!25;UBERON:0000153!3.22e-15!129;UBERON:0007811!3.22e-15!129;UBERON:0000033!1.11e-14!123;UBERON:0000988!1.22e-14!3;UBERON:0004121!6.89e-13!169;UBERON:0000924!1.83e-12!173;UBERON:0006601!1.83e-12!173;UBERON:0007023!9.34e-12!115;UBERON:0000369!1.19e-11!4;UBERON:0002435!1.19e-11!4;UBERON:0000204!1.19e-11!4;UBERON:0010082!1.19e-11!4;UBERON:0009663!2.79e-11!7;UBERON:0001876!6.35e-11!2;UBERON:0002148!1.77e-10!2;UBERON:0009662!1.77e-10!2;UBERON:0000473!2.78e-10!8;UBERON:0000349!1.94e-09!5;UBERON:0002298!1.97e-09!8;UBERON:0001872!2.74e-09!5;UBERON:0005383!1.59e-07!3;UBERON:0005382!1.59e-07!3;UBERON:0000200!1.61e-07!6;UBERON:0003135!1.74e-07!11;UBERON:0006331!2.92e-07!3;UBERON:0002771!3.21e-07!3;UBERON:0000025!9.13e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.90e-28;8!UBERON:0003135;1.39e-20;11!UBERON:0000922;4.13e-18;49!UBERON:0000991;6.09e-11;21!UBERON:0003101;1.86e-10;22!UBERON:0000079;1.86e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.04e-28,8;UBERON:0003135,1.43e-20,11;UBERON:0000991,6.17e-11,21;UBERON:0009196,6.17e-11,21;UBERON:0009117,6.17e-11,21;UBERON:0005564,6.17e-11,21;UBERON:0004176,1.88e-10,22;UBERON:0003101,1.88e-10,22;UBERON:0000079,1.88e-10,22 | |||
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|short_description=p@chr6:33084418..33084441,+ | |||
}} | }} |
Latest revision as of 00:36, 31 July 2015
Short description: | p@chr6:33084418..33084441, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:33084418..33084441, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.66e-71 | 5 |
germ line cell | 4.55e-32 | 7 |
germ cell | 4.55e-32 | 7 |
neuron | 1.97e-22 | 6 |
neuroblast | 1.97e-22 | 6 |
electrically signaling cell | 1.97e-22 | 6 |
neuronal stem cell | 5.37e-17 | 8 |
melanocyte | 1.75e-13 | 10 |
melanoblast | 1.75e-13 | 10 |
pigment cell | 8.44e-10 | 14 |
neurectodermal cell | 3.09e-08 | 59 |
neurecto-epithelial cell | 5.12e-07 | 20 |
ectodermal cell | 9.94e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 4.04e-28 | 8 |
male reproductive organ | 1.43e-20 | 11 |
gonad | 6.17e-11 | 21 |
indifferent external genitalia | 6.17e-11 | 21 |
indifferent gonad | 6.17e-11 | 21 |
gonad primordium | 6.17e-11 | 21 |
external genitalia | 1.88e-10 | 22 |
male organism | 1.88e-10 | 22 |
male reproductive system | 1.88e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.88e-10 | 22 |
germ cell cancer | 1.88e-10 | 22 |