FFCP PHASE1:Hg19::chr6:34217138..34217144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:34217138..34217144,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr6:34217138..34217144,+ | |description=CAGE_peak_at_chr6:34217138..34217144,+ | ||
|id=chr6:34217138..34217144,+ | |id=chr6:34217138..34217144,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.78e-11!140;CL:0000624!1.29e-10!6;CL:0000037!1.93e-10!172;CL:0000566!1.93e-10!172;CL:0002031!4.63e-10!124;CL:0002087!5.66e-10!119;CL:0002032!9.32e-10!165;CL:0000837!9.32e-10!165;CL:0000988!2.41e-09!182;CL:0000623!7.09e-09!3;CL:0000825!7.09e-09!3;CL:0000838!2.31e-08!52;CL:0000542!3.94e-08!53;CL:0000051!3.94e-08!53;CL:0000791!5.36e-08!18;CL:0000789!5.36e-08!18;CL:0002420!5.36e-08!18;CL:0002419!5.36e-08!18;CL:0000790!5.36e-08!18 | |ontology_enrichment_celltype=CL:0000738!2.78e-11!140;CL:0000624!1.29e-10!6;CL:0000037!1.93e-10!172;CL:0000566!1.93e-10!172;CL:0002031!4.63e-10!124;CL:0002087!5.66e-10!119;CL:0002032!9.32e-10!165;CL:0000837!9.32e-10!165;CL:0000988!2.41e-09!182;CL:0000623!7.09e-09!3;CL:0000825!7.09e-09!3;CL:0000838!2.31e-08!52;CL:0000542!3.94e-08!53;CL:0000051!3.94e-08!53;CL:0000791!5.36e-08!18;CL:0000789!5.36e-08!18;CL:0002420!5.36e-08!18;CL:0002419!5.36e-08!18;CL:0000790!5.36e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.32e-30;18!CL:0000789;1.32e-30;18!CL:0002419;1.32e-30;18!CL:0000623;1.47e-30;3!CL:0000084;3.88e-22;25!CL:0000625;1.04e-18;11!CL:0000624;1.41e-15;6!CL:0002593;2.74e-12;2!CL:0000542;4.10e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-30,18;CL:0000789,1.24e-30,18;CL:0002420,1.24e-30,18;CL:0002419,1.24e-30,18;CL:0000790,1.24e-30,18;CL:0000623,1.47e-30,3;CL:0000825,1.47e-30,3;CL:0000084,3.71e-22,25;CL:0000827,3.71e-22,25;CL:0000838,1.14e-20,52;CL:0000542,2.81e-20,53;CL:0000051,2.81e-20,53;CL:0000625,1.04e-18,11;CL:0000624,1.31e-15,6;CL:0002593,3.62e-12,2;CL:0002087,3.34e-09,115;CL:0002031,8.17e-09,120;CL:0000738,9.30e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.32e-30;18!CL:0000051;4.10e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.84e-07!15;UBERON:0000179!4.84e-07!15;UBERON:0000463!4.84e-07!15;UBERON:0002390!8.00e-07!102;UBERON:0003061!8.00e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.74e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.62e-12,2 | |||
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| ||
|short_description=p@chr6:34217138..34217144,+ | |short_description=p@chr6:34217138..34217144,+ | ||
}} | }} |
Latest revision as of 00:52, 31 July 2015
Short description: | p@chr6:34217138..34217144, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:34217138..34217144, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.24e-30 | 18 |
alpha-beta T cell | 1.24e-30 | 18 |
immature T cell | 1.24e-30 | 18 |
mature T cell | 1.24e-30 | 18 |
immature alpha-beta T cell | 1.24e-30 | 18 |
natural killer cell | 1.47e-30 | 3 |
pro-NK cell | 1.47e-30 | 3 |
T cell | 3.71e-22 | 25 |
pro-T cell | 3.71e-22 | 25 |
lymphoid lineage restricted progenitor cell | 1.14e-20 | 52 |
lymphocyte | 2.81e-20 | 53 |
common lymphoid progenitor | 2.81e-20 | 53 |
CD8-positive, alpha-beta T cell | 1.04e-18 | 11 |
CD4-positive, alpha-beta T cell | 1.31e-15 | 6 |
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
nongranular leukocyte | 3.34e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.17e-09 | 120 |
leukocyte | 9.30e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.62e-12 | 2 |