FFCP PHASE1:Hg19::chr6:34494812..34494815,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:34494812..34494815,- | |||
|description=CAGE_peak_at_chr6:34494812..34494815,- | |description=CAGE_peak_at_chr6:34494812..34494815,- | ||
|id=chr6:34494812..34494815,- | |id=chr6:34494812..34494815,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000037;3.28e-23;1!CL:0001024;3.28e-23;1!CL:0000540;9.04e-16;6!CL:0000404;9.04e-16;6!CL:0002262;2.59e-12;2!CL:1000398;2.59e-12;2!CL:0000307;8.96e-09;3 | |ontology_enrichment_celltype_v019=CL:0000037;3.28e-23;1!CL:0001024;3.28e-23;1!CL:0000540;9.04e-16;6!CL:0000404;9.04e-16;6!CL:0002262;2.59e-12;2!CL:1000398;2.59e-12;2!CL:0000307;8.96e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0001024,4.10e-23,1;CL:0000540,8.39e-16,6;CL:0000031,8.39e-16,6;CL:0000404,8.39e-16,6;CL:0002262,2.59e-12,2;CL:1000398,2.59e-12,2;CL:0000047,4.18e-12,8;CL:0000068,8.96e-09,3;CL:0000069,8.96e-09,3;CL:0000307,8.96e-09,3;CL:0000377,8.96e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000031;9.04e-16;6!CL:0000377;8.96e-09;3 | |ontology_enrichment_development_v019=CL:0000031;9.04e-16;6!CL:0000377;8.96e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;5.83e-12;8 | |ontology_enrichment_disease_v019=DOID:1036;5.83e-12;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,6.16e-12,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.59e-12;2!UBERON:0003497;2.59e-12;2!UBERON:0003909;2.59e-12;2!UBERON:0003835;2.59e-12;2!UBERON:0001280;1.21e-08;3!UBERON:0004647;1.21e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001281;2.59e-12;2!UBERON:0003497;2.59e-12;2!UBERON:0003909;2.59e-12;2!UBERON:0003835;2.59e-12;2!UBERON:0001280;1.21e-08;3!UBERON:0004647;1.21e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.59e-12,2;UBERON:0003497,2.59e-12,2;UBERON:0003909,2.59e-12,2;UBERON:0003835,2.59e-12,2;UBERON:0001280,1.21e-08,3;UBERON:0004647,1.21e-08,3;UBERON:0005171,1.21e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0.739508020333575,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0.871901815541886,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,3.18969375826582,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.355123450626254,0.657017248110473,0,0.697262270759755,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0.6970372701606,0,0.532306030317022,1.73986598415015,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0.497992903438899,0.159426272728822,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0,0,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.910347586283997,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0.886642856860642,0,0.32681539055697,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,1.11255605286265,0,0.163232808159148,0.565412285735763,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0.411125773940253,0.397429223405979,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0.864328787928898,0.124252535565433,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.316801009558219,0,0,0,0,0.5085370753095,0,0,0,0,1.72394293573612,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.37494122388632,0.758245587708239,0,0,0,0,0.895528817321244,0.233713309847224,0,0,0,0,0,0,0,0.73927574994817,0,0,0,0,0,0,0.300515217994437,0,0.813741466409323,0.181848659202559,0,0,0,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0.567515953566836,0,0,0,0.383683113910955,0.323474434190045,0.314531883711793,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0,0,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.897054900644907,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0,0.739508020333575,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0.871901815541886,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,3.18969375826582,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.355123450626254,0.657017248110473,0,0.697262270759755,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0.6970372701606,0,0.532306030317022,1.73986598415015,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0.497992903438899,0.159426272728822,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0,0,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.910347586283997,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0.886642856860642,0,0.32681539055697,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,1.11255605286265,0,0.163232808159148,0.565412285735763,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0.411125773940253,0.397429223405979,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0.864328787928898,0.124252535565433,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.316801009558219,0,0,0,0,0.5085370753095,0,0,0,0,1.72394293573612,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.37494122388632,0.758245587708239,0,0,0,0,0.895528817321244,0.233713309847224,0,0,0,0,0,0,0,0.73927574994817,0,0,0,0,0,0,0.300515217994437,0,0.813741466409323,0.181848659202559,0,0,0,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0.567515953566836,0,0,0,0.383683113910955,0.323474434190045,0.314531883711793,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0,0,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.897054900644907,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:34494812..34494815,- | |short_description=p@chr6:34494812..34494815,- | ||
}} | }} |
Latest revision as of 00:54, 31 July 2015
Short description: | p@chr6:34494812..34494815, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:34494812..34494815, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 4.10e-23 | 1 |
neuron | 8.39e-16 | 6 |
neuroblast | 8.39e-16 | 6 |
electrically signaling cell | 8.39e-16 | 6 |
endothelial cell of sinusoid | 2.59e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.59e-12 | 2 |
neuronal stem cell | 4.18e-12 | 8 |
duct epithelial cell | 8.96e-09 | 3 |
branched duct epithelial cell | 8.96e-09 | 3 |
tracheal epithelial cell | 8.96e-09 | 3 |
tracheoblast | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.59e-12 | 2 |
abdomen blood vessel | 2.59e-12 | 2 |
sinusoid | 2.59e-12 | 2 |
abdominal segment blood vessel | 2.59e-12 | 2 |
liver parenchyma | 1.21e-08 | 3 |
liver lobule | 1.21e-08 | 3 |
hepatic duct | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.16e-12 | 8 |