FFCP PHASE1:Hg19::chr6:49533964..49533975,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:49533964..49533975,+
|short_description=p@chr6:49533964..49533975,+
|description=CAGE_peak_at_chr6:49533964..49533975,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:49533964..49533975,+ | |||
|description=CAGE_peak_at_chr6:49533964..49533975,+ | |||
|id=chr6:49533964..49533975,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.26e-52!24;CL:0000115!8.73e-44!35;CL:0000071!3.33e-35!18;CL:0002546!3.33e-35!18;CL:0002078!7.01e-34!44;CL:0000213!4.22e-25!57;CL:0000215!4.22e-25!57;CL:0005020!2.16e-19!6;CL:0002138!2.16e-19!6;CL:0005022!2.16e-19!6;CL:0002144!3.57e-15!3;CL:0002543!7.75e-13!6;CL:1000413!9.17e-13!9;CL:0002544!1.11e-12!6;CL:0000222!6.70e-11!119;CL:0000076!2.14e-08!62;CL:0002618!2.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.93e-42;24!CL:0002144;1.64e-38;3!CL:0000071;1.35e-25;18!CL:0000115;5.97e-21;36!CL:0002138;7.48e-20;6!CL:0002078;2.23e-17;45!CL:0000213;6.42e-12;58!CL:0000215;6.42e-12;58!CL:0002618;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.73e-42,24;CL:0002144,2.18e-38,3;CL:0000115,1.73e-28,36;CL:0000071,1.44e-25,18;CL:0002546,1.44e-25,18;CL:0002078,7.09e-23,45;CL:0005020,5.89e-20,6;CL:0002138,5.89e-20,6;CL:0005022,5.89e-20,6;CL:0000213,7.88e-18,58;CL:0000215,7.88e-18,58;CL:0002618,9.90e-11,3;CL:0000222,1.15e-08,121;CL:0000076,1.13e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.35e-25;18!CL:0005022;7.48e-20;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.33e-35!18;UBERON:0004638!3.33e-35!18;UBERON:0004852!3.33e-35!18;UBERON:0000487!2.53e-28!22;UBERON:0006914!1.31e-24!25;UBERON:0000055!9.31e-18!69;UBERON:0001915!3.57e-15!3;UBERON:0001982!3.57e-15!3;UBERON:0002049!5.69e-15!79;UBERON:0007798!5.69e-15!79;UBERON:0001473!1.77e-14!8;UBERON:0004536!1.77e-14!8;UBERON:0006558!1.77e-14!8;UBERON:0003915!9.17e-13!9;UBERON:0004700!9.17e-13!9;UBERON:0001917!9.17e-13!9;UBERON:0004535!3.34e-12!110;UBERON:0001009!9.34e-12!113;UBERON:0002465!1.59e-11!10;UBERON:0001981!2.11e-10!60;UBERON:0007500!2.11e-10!60;UBERON:0004537!2.11e-10!60;UBERON:0006965!2.11e-10!60;UBERON:0004872!4.29e-09!84;UBERON:0001638!1.42e-08!9;UBERON:0003920!1.42e-08!9;UBERON:0004582!1.42e-08!9;UBERON:0003914!1.75e-08!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.64e-38;3!UBERON:0001915;1.64e-38;3!UBERON:0001982;1.64e-38;3!UBERON:0004638;1.35e-25;18!UBERON:0001986;1.35e-25;18!UBERON:0004852;1.35e-25;18!UBERON:0000487;4.61e-21;22!UBERON:0006914;1.31e-18;25!UBERON:0001473;3.66e-15;8!UBERON:0004536;3.66e-15;8!UBERON:0006558;3.66e-15;8!UBERON:0000490;1.08e-13;33!UBERON:0000055;3.70e-13;65!UBERON:0002465;2.44e-12;10!UBERON:0007500;8.72e-08;56!UBERON:0001981;8.72e-08;56!UBERON:0004537;8.72e-08;56!UBERON:0002066;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.18e-38,3;UBERON:0001915,2.18e-38,3;UBERON:0001982,2.18e-38,3;UBERON:0004638,1.44e-25,18;UBERON:0001986,1.44e-25,18;UBERON:0004852,1.44e-25,18;UBERON:0000487,4.86e-21,22;UBERON:0006914,1.37e-18,25;UBERON:0000055,2.96e-15,68;UBERON:0001473,3.06e-15,8;UBERON:0004536,3.06e-15,8;UBERON:0006558,3.06e-15,8;UBERON:0002049,2.47e-13,78;UBERON:0007798,2.47e-13,78;UBERON:0002465,2.12e-12,10;UBERON:0004535,1.33e-09,109;UBERON:0001009,2.37e-09,112;UBERON:0007500,3.63e-08,59;UBERON:0001981,3.63e-08,59;UBERON:0004537,3.63e-08,59;UBERON:0006965,3.63e-08,59;UBERON:0002066,6.04e-07,5 | |||
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| ||
|short_description=p@chr6:49533964..49533975,+ | |||
}} | }} |
Latest revision as of 02:14, 31 July 2015
Short description: | p@chr6:49533964..49533975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:49533964..49533975, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.73e-42 | 24 |
capillary endothelial cell | 2.18e-38 | 3 |
endothelial cell | 1.73e-28 | 36 |
blood vessel endothelial cell | 1.44e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.44e-25 | 18 |
meso-epithelial cell | 7.09e-23 | 45 |
lymphangioblast | 5.89e-20 | 6 |
endothelial cell of lymphatic vessel | 5.89e-20 | 6 |
vascular lymphangioblast | 5.89e-20 | 6 |
lining cell | 7.88e-18 | 58 |
barrier cell | 7.88e-18 | 58 |
endothelial cell of umbilical vein | 9.90e-11 | 3 |
mesodermal cell | 1.15e-08 | 121 |
squamous epithelial cell | 1.13e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.18e-38 | 3 |
endothelium of capillary | 2.18e-38 | 3 |
capillary | 2.18e-38 | 3 |
blood vessel endothelium | 1.44e-25 | 18 |
endothelium | 1.44e-25 | 18 |
cardiovascular system endothelium | 1.44e-25 | 18 |
simple squamous epithelium | 4.86e-21 | 22 |
squamous epithelium | 1.37e-18 | 25 |
vessel | 2.96e-15 | 68 |
lymphatic vessel | 3.06e-15 | 8 |
lymph vasculature | 3.06e-15 | 8 |
lymphatic part of lymphoid system | 3.06e-15 | 8 |
vasculature | 2.47e-13 | 78 |
vascular system | 2.47e-13 | 78 |
lymphoid system | 2.12e-12 | 10 |
cardiovascular system | 1.33e-09 | 109 |
circulatory system | 2.37e-09 | 112 |
epithelial tube open at both ends | 3.63e-08 | 59 |
blood vessel | 3.63e-08 | 59 |
blood vasculature | 3.63e-08 | 59 |
vascular cord | 3.63e-08 | 59 |
umbilical vein | 6.04e-07 | 5 |