FFCP PHASE1:Hg19::chr6:75893613..75893629,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:75893613..75893629,+
|short_description=p@chr6:75893613..75893629,+
|description=CAGE_peak_at_chr6:75893613..75893629,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:75893613..75893629,+ | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr6:75893613..75893629,+ | |||
|id=chr6:75893613..75893629,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.36e-24!75;CL:0000055!9.57e-17!180;CL:0002620!7.44e-16!23;CL:0002334!1.33e-12!12;CL:0000048!4.24e-08!430;CL:0000548!5.28e-08!679;CL:0000004!5.28e-08!679;CL:0000255!5.28e-08!679;CL:0000012!7.72e-08!682;CL:0000723!1.04e-07!436;CL:0000034!3.28e-07!444;CL:0000144!3.94e-07!625;CL:0002580!7.36e-07!3;CL:0002371!8.18e-07!591;CL:0000134!9.86e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002615;4.70e-17;3!CL:0002580;1.04e-16;3!CL:0000214;1.49e-16;3!CL:0000135;2.38e-16;3!CL:0000388;2.38e-16;3!CL:0000136;6.05e-15;13!CL:0002616;1.93e-13;1!CL:0000153;2.41e-12;9!CL:0000447;2.41e-12;9!CL:0000499;2.34e-10;28!CL:0002334;1.87e-09;12!CL:0000327;1.28e-07;15!CL:0002617;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.90e-17,3;CL:0002580,7.90e-17,3;CL:0000214,1.88e-16,3;CL:0000135,2.20e-16,3;CL:0000388,2.20e-16,3;CL:0002616,1.82e-13,1;CL:0000136,5.49e-13,15;CL:0000153,2.60e-12,9;CL:0000447,2.60e-12,9;CL:0000499,2.39e-10,28;CL:0002334,1.74e-09,12;CL:0000327,1.34e-07,15;CL:0002617,4.42e-07,2;CL:0000057,6.36e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.06e-09!5;DOID:450!6.06e-09!5;DOID:66!6.06e-09!5;DOID:423!6.06e-09!5;DOID:0080000!6.06e-09!5;DOID:11722!6.06e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;2.46e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.32e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.39e-11!6;UBERON:0002358!2.39e-11!6;UBERON:0003684!2.39e-11!6;UBERON:0001178!2.39e-11!6;UBERON:0003102!3.86e-10!95;UBERON:0004457!3.03e-09!12;UBERON:0000042!3.03e-09!12;UBERON:0002199!7.59e-09!45;UBERON:0002416!7.59e-09!45;UBERON:0002097!2.19e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.56e-33;9!UBERON:0000042;8.56e-33;9!UBERON:0003688;1.41e-18;6!UBERON:0002358;1.41e-18;6!UBERON:0003684;1.41e-18;6!UBERON:0001178;1.41e-18;6!UBERON:0006915;1.49e-16;3!UBERON:0007616;1.49e-16;3!UBERON:0002217;1.49e-16;3!UBERON:0002018;1.49e-16;3!UBERON:0007846;2.38e-16;3!UBERON:0000043;2.38e-16;3!UBERON:0007845;2.38e-16;3!UBERON:0000310;3.81e-11;10!UBERON:0001443;3.50e-10;11!UBERON:0005406;2.35e-07;2!UBERON:0004905;9.11e-07;8!UBERON:0000982;9.11e-07;8!UBERON:0004770;9.11e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.60e-24,12;UBERON:0000042,1.60e-24,12;UBERON:0003688,1.54e-18,6;UBERON:0002358,1.54e-18,6;UBERON:0003684,1.54e-18,6;UBERON:0001178,1.54e-18,6;UBERON:0006915,1.88e-16,3;UBERON:0007616,1.88e-16,3;UBERON:0002217,1.88e-16,3;UBERON:0002018,1.88e-16,3;UBERON:0007846,2.20e-16,3;UBERON:0000043,2.20e-16,3;UBERON:0007845,2.20e-16,3;UBERON:0000310,3.38e-11,10;UBERON:0001443,3.14e-10,11;UBERON:0005406,2.28e-07,2;UBERON:0004905,9.94e-07,8;UBERON:0000982,9.94e-07,8;UBERON:0004770,9.94e-07,8 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.281908808191942,3.00219895059391,6.25745532198203,4.36169262050184,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.462390822334,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0.919463387397059,0,0,0.538168907066586,1.49490172172997,0.423863802319124,0.900273288253207,0.103052529238439,1.54584324027377,0.37223371266318,0.337552664482532,0.194874010322397,0.504867548488229,0.552299391853796,0.969876340912871,0.710019185033229,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0.55146986366197,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0.946214490203608,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,4.14347327877769,1.96462066103151,0.640695746278505,2.04682899626681,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.409499734223957,0.707027159768564,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.491245205065606,0,0,1.05553817648832,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.378806010550178,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0.673498977531838,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0.908391896352783,1.2846031433459,0.281908808191942,3.00219895059391,6.25745532198203,4.36169262050184,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.462390822334,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0.919463387397059,0,0,0.538168907066586,1.49490172172997,0.423863802319124,0.900273288253207,0.103052529238439,1.54584324027377,0.37223371266318,0.337552664482532,0.194874010322397,0.504867548488229,0.552299391853796,0.969876340912871,0.710019185033229,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0.55146986366197,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0.946214490203608,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,4.14347327877769,1.96462066103151,0.640695746278505,2.04682899626681,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.409499734223957,0.707027159768564,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.491245205065606,0,0,1.05553817648832,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.378806010550178,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0.673498977531838,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:75893613..75893629,+ | |||
}} | }} |
Latest revision as of 03:15, 31 July 2015
Short description: | p@chr6:75893613..75893629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75893613..75893629, + |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.90e-17 | 3 |
preadipocyte of the breast | 7.90e-17 | 3 |
synovial cell | 1.88e-16 | 3 |
fibrocyte | 2.20e-16 | 3 |
tendon cell | 2.20e-16 | 3 |
perirenal adipocyte cell | 1.82e-13 | 1 |
fat cell | 5.49e-13 | 15 |
GAG secreting cell | 2.60e-12 | 9 |
carbohydrate secreting cell | 2.60e-12 | 9 |
stromal cell | 2.39e-10 | 28 |
preadipocyte | 1.74e-09 | 12 |
extracellular matrix secreting cell | 1.34e-07 | 15 |
adipocyte of breast | 4.42e-07 | 2 |
fibroblast | 6.36e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.60e-24 | 12 |
serous membrane | 1.60e-24 | 12 |
omentum | 1.54e-18 | 6 |
peritoneum | 1.54e-18 | 6 |
abdominal cavity | 1.54e-18 | 6 |
visceral peritoneum | 1.54e-18 | 6 |
stratified squamous epithelium | 1.88e-16 | 3 |
layer of synovial tissue | 1.88e-16 | 3 |
synovial joint | 1.88e-16 | 3 |
synovial membrane of synovial joint | 1.88e-16 | 3 |
dense regular connective tissue | 2.20e-16 | 3 |
tendon | 2.20e-16 | 3 |
regular connective tissue | 2.20e-16 | 3 |
breast | 3.38e-11 | 10 |
chest | 3.14e-10 | 11 |
perirenal fat | 2.28e-07 | 2 |
articulation | 9.94e-07 | 8 |
skeletal joint | 9.94e-07 | 8 |
articular system | 9.94e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.32e-13 | 1 |