FFCP PHASE1:Hg19::chr7:115967923..115967936,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000444244_5end | |||
|cluster_id=chr7:115967923..115967936,- | |||
|coexpression_cluster_id=C4645 | |||
|description=CAGE_peak_2_at_ENST00000444244_5end | |||
|id=chr7:115967923..115967936,- | |||
|ontology_enrichment_celltype=CL:0002139!2.01e-36!24;CL:0000115!2.68e-29!35;CL:0000071!5.24e-27!18;CL:0002546!5.24e-27!18;CL:0000222!5.04e-25!119;CL:0002078!1.62e-21!44;CL:0000213!3.54e-20!57;CL:0000215!3.54e-20!57;CL:0000220!2.61e-13!246;CL:0002321!4.62e-13!248;CL:0002543!5.16e-12!6;CL:1000413!5.41e-12!9;CL:0005020!6.07e-11!6;CL:0002138!6.07e-11!6;CL:0005022!6.07e-11!6;CL:0002371!2.33e-10!591;CL:0002620!2.43e-10!23;CL:0002551!2.94e-10!6;CL:0000055!9.15e-10!180;CL:0000144!1.04e-09!625;CL:0000076!6.01e-09!62;CL:0002544!3.22e-08!6;CL:0000548!3.85e-08!679;CL:0000004!3.85e-08!679;CL:0000255!3.85e-08!679;CL:0000012!5.66e-08!682;CL:0000680!2.74e-07!57;CL:0000056!2.74e-07!57;CL:0000355!2.74e-07!57;CL:0000187!3.54e-07!54;CL:0002618!4.91e-07!3;CL:0000183!5.46e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.52e-52;24!CL:0000071;3.35e-41;18!CL:0000115;2.88e-29;36!CL:0002543;1.04e-27;6!CL:0002078;3.26e-20;45!CL:0000213;1.17e-17;58!CL:0000215;1.17e-17;58!CL:0002618;2.17e-15;3!CL:1000413;6.72e-13;9!CL:0002544;7.61e-13;6!CL:0002138;7.84e-13;6!CL:0002551;7.23e-12;6!CL:0000076;3.28e-08;63!CL:0002573;2.89e-07;2!CL:0002144;3.37e-07;3!CL:0002590;7.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.07e-52,24;CL:0000071,2.24e-41,18;CL:0002546,2.24e-41,18;CL:0000115,6.46e-38,36;CL:0002078,1.85e-29,45;CL:0002543,6.03e-28,6;CL:0000213,1.56e-24,58;CL:0000215,1.56e-24,58;CL:0000222,1.96e-19,121;CL:0002618,2.23e-15,3;CL:1000413,5.87e-13,9;CL:0002544,7.51e-13,6;CL:0005020,8.23e-13,6;CL:0002138,8.23e-13,6;CL:0005022,8.23e-13,6;CL:0002551,7.14e-12,6;CL:0000076,2.04e-11,63;CL:0002321,1.62e-09,250;CL:0002573,2.81e-07,2;CL:0002144,3.93e-07,3;CL:0002590,8.56e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.35e-41;18!CL:0005022;7.84e-13;6!CL:0000222;9.80e-08;121 | |||
|ontology_enrichment_disease=DOID:2394!9.96e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.24e-27!18;UBERON:0004638!5.24e-27!18;UBERON:0004852!5.24e-27!18;UBERON:0000487!4.49e-21!22;UBERON:0002049!3.61e-19!79;UBERON:0007798!3.61e-19!79;UBERON:0006914!6.92e-18!25;UBERON:0000055!4.42e-14!69;UBERON:0003915!5.41e-12!9;UBERON:0004700!5.41e-12!9;UBERON:0001917!5.41e-12!9;UBERON:0000490!1.36e-11!138;UBERON:0004535!1.60e-11!110;UBERON:0001009!6.05e-11!113;UBERON:0001473!9.23e-11!8;UBERON:0004536!9.23e-11!8;UBERON:0006558!9.23e-11!8;UBERON:0001638!5.18e-10!9;UBERON:0003920!5.18e-10!9;UBERON:0004582!5.18e-10!9;UBERON:0004290!5.85e-10!70;UBERON:0001981!1.02e-08!60;UBERON:0007500!1.02e-08!60;UBERON:0004537!1.02e-08!60;UBERON:0006965!1.02e-08!60;UBERON:0002465!2.54e-08!10;UBERON:0000486!1.72e-07!82;UBERON:0000914!2.54e-07!83;UBERON:0002329!2.54e-07!83;UBERON:0003077!2.54e-07!83;UBERON:0003059!2.54e-07!83;UBERON:0007282!2.54e-07!83;UBERON:0009618!2.54e-07!83;UBERON:0007285!2.54e-07!83;UBERON:0002199!5.35e-07!45;UBERON:0002416!5.35e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.35e-41;18!UBERON:0001986;3.35e-41;18!UBERON:0004852;3.35e-41;18!UBERON:0000487;3.55e-33;22!UBERON:0006914;7.66e-29;25!UBERON:0000490;5.60e-19;33!UBERON:0001638;2.84e-18;9!UBERON:0003920;2.84e-18;9!UBERON:0004582;2.84e-18;9!UBERON:0001473;2.40e-14;8!UBERON:0004536;2.40e-14;8!UBERON:0006558;2.40e-14;8!UBERON:0003915;6.72e-13;9!UBERON:0004700;6.72e-13;9!UBERON:0001917;6.72e-13;9!UBERON:0002465;2.02e-11;10!UBERON:0002049;8.18e-10;75!UBERON:0007798;8.18e-10;75!UBERON:0000055;1.52e-09;65!UBERON:0002066;2.10e-09;5!UBERON:0007500;3.62e-08;56!UBERON:0001981;3.62e-08;56!UBERON:0004537;3.62e-08;56!UBERON:0002067;6.06e-08;9!UBERON:0001009;1.23e-07;112!UBERON:0010523;3.37e-07;3!UBERON:0001915;3.37e-07;3!UBERON:0001982;3.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.24e-41,18;UBERON:0001986,2.24e-41,18;UBERON:0004852,2.24e-41,18;UBERON:0000487,2.56e-33,22;UBERON:0006914,5.76e-29,25;UBERON:0002049,3.37e-21,78;UBERON:0007798,3.37e-21,78;UBERON:0001638,1.98e-18,9;UBERON:0003920,1.98e-18,9;UBERON:0004582,1.98e-18,9;UBERON:0000055,5.17e-18,68;UBERON:0001473,2.34e-14,8;UBERON:0004536,2.34e-14,8;UBERON:0006558,2.34e-14,8;UBERON:0004535,9.35e-14,109;UBERON:0001009,2.95e-13,112;UBERON:0003915,5.87e-13,9;UBERON:0004700,5.87e-13,9;UBERON:0001917,5.87e-13,9;UBERON:0002465,1.98e-11,10;UBERON:0000490,8.13e-11,148;UBERON:0007500,1.31e-10,59;UBERON:0001981,1.31e-10,59;UBERON:0004537,1.31e-10,59;UBERON:0006965,1.31e-10,59;UBERON:0002066,2.13e-09,5;UBERON:0002067,6.02e-08,9;UBERON:0004016,6.02e-08,9;UBERON:0010083,6.02e-08,9;UBERON:0010523,3.93e-07,3;UBERON:0001915,3.93e-07,3;UBERON:0001982,3.93e-07,3;UBERON:0004872,9.24e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.492484232307152,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,3.9752481473341,0.860234595106124,3.12426451446835,2.82653970962005,2.93649605346934,0.275118041940067,0.208994966536811,5.68516870172524,5.69226020298736,7.69857409358742,2.01414658554573,4.56163263431108,0.976248230192678,5.14728312484216,0,19.7352399507816,5.61323431565425,6.86930030948266,1.53316637465883,2.84779697870439,2.93122790288652,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.624320153660641,2.2818872861778,0.149448680551801,1.29177948508141,1.13311061057692,1.54495887372473,0.204154171254893,0.61417158655884,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,1.15493158208859,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,1.50171528921959,0,0.784917590417525,0,2.42016343209135,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.428933980974443,0,0.823240336780769,2.28015329005615,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.616838775210622,0,0,0,0.232420756919918,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.680374821106063,0.647747748306418,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.307007349452259,2.06754858726796,1.28904293841928,0.435050081742686,0.681813019328807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,2.53103539774981,1.14378116354295,0.767693373934002,0.42793898803392,0,0,1.43897966066652,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0.608731130888112,0,0.281695602532241,0.573645408816206,0,0.7133421029625,1.06428319221179,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,11.5230641755983,0,0,0,0,0,0,0,0.397429223405979,0,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0,0,0,0,0.151230923763239,0,0,0.477890301491107,1.34940933649081,0.155262956876259,0,0.53168342911599,3.65221543268214,0,0,0,1.09109195521536,0,0.928067519756987,2.78667122089031,0.800055529326307,0,0,1.26184898228651,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,1.59020231351293,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90495602410866,3.8346032141621,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000444244 | |||
}} |
Latest revision as of 05:14, 31 July 2015
Short description: | p2@ENST00000444244 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000444244_5end |
Coexpression cluster: | C4645_Endothelial_epithelioid_Smooth_schwannoma_mesenchymal_Skeletal_mesodermal |
Association with transcript: | 13bp_to_ENST00000444244_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.07e-52 | 24 |
blood vessel endothelial cell | 2.24e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.24e-41 | 18 |
endothelial cell | 6.46e-38 | 36 |
meso-epithelial cell | 1.85e-29 | 45 |
vein endothelial cell | 6.03e-28 | 6 |
lining cell | 1.56e-24 | 58 |
barrier cell | 1.56e-24 | 58 |
mesodermal cell | 1.96e-19 | 121 |
endothelial cell of umbilical vein | 2.23e-15 | 3 |
endothelial cell of artery | 5.87e-13 | 9 |
aortic endothelial cell | 7.51e-13 | 6 |
lymphangioblast | 8.23e-13 | 6 |
endothelial cell of lymphatic vessel | 8.23e-13 | 6 |
vascular lymphangioblast | 8.23e-13 | 6 |
fibroblast of dermis | 7.14e-12 | 6 |
squamous epithelial cell | 2.04e-11 | 63 |
embryonic cell | 1.62e-09 | 250 |
Schwann cell | 2.81e-07 | 2 |
capillary endothelial cell | 3.93e-07 | 3 |
smooth muscle cell of the brain vasculature | 8.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.24e-41 | 18 |
endothelium | 2.24e-41 | 18 |
cardiovascular system endothelium | 2.24e-41 | 18 |
simple squamous epithelium | 2.56e-33 | 22 |
squamous epithelium | 5.76e-29 | 25 |
vasculature | 3.37e-21 | 78 |
vascular system | 3.37e-21 | 78 |
vein | 1.98e-18 | 9 |
venous blood vessel | 1.98e-18 | 9 |
venous system | 1.98e-18 | 9 |
vessel | 5.17e-18 | 68 |
lymphatic vessel | 2.34e-14 | 8 |
lymph vasculature | 2.34e-14 | 8 |
lymphatic part of lymphoid system | 2.34e-14 | 8 |
cardiovascular system | 9.35e-14 | 109 |
circulatory system | 2.95e-13 | 112 |
endothelial tube | 5.87e-13 | 9 |
arterial system endothelium | 5.87e-13 | 9 |
endothelium of artery | 5.87e-13 | 9 |
lymphoid system | 1.98e-11 | 10 |
unilaminar epithelium | 8.13e-11 | 148 |
epithelial tube open at both ends | 1.31e-10 | 59 |
blood vessel | 1.31e-10 | 59 |
blood vasculature | 1.31e-10 | 59 |
vascular cord | 1.31e-10 | 59 |
umbilical vein | 2.13e-09 | 5 |
dermis | 6.02e-08 | 9 |
dermatome | 6.02e-08 | 9 |
future dermis | 6.02e-08 | 9 |
microcirculatory vessel | 3.93e-07 | 3 |
endothelium of capillary | 3.93e-07 | 3 |
capillary | 3.93e-07 | 3 |
splanchnic layer of lateral plate mesoderm | 9.24e-07 | 83 |