FFCP PHASE1:Hg19::chr7:130600673..130600688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:130600673..130600688,+ | |||
|coexpression_cluster_id=C3294 | |coexpression_cluster_id=C3294 | ||
|description=CAGE_peak_at_chr7:130600673..130600688,+ | |description=CAGE_peak_at_chr7:130600673..130600688,+ | ||
|id=chr7:130600673..130600688,+ | |id=chr7:130600673..130600688,+ | ||
|ontology_enrichment_celltype=CL:0002504!2.47e-08!3;CL:1000279!2.47e-08!3;CL:1000280!2.47e-08!3;CL:0002622!3.59e-08!3 | |ontology_enrichment_celltype=CL:0002504!2.47e-08!3;CL:1000279!2.47e-08!3;CL:1000280!2.47e-08!3;CL:0002622!3.59e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.25e-19;10!CL:0002567;1.49e-16;3!CL:0000182;3.11e-16;12!CL:0000147;1.31e-13;14!CL:0002566;6.82e-13;1!CL:0000710;1.34e-09;20!CL:0000075;3.70e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.97e-19,10;CL:0000541,5.97e-19,10;CL:0002567,1.88e-16,3;CL:0000182,3.11e-16,12;CL:0000147,1.27e-13,14;CL:0002566,4.23e-13,1;CL:0000710,1.31e-09,20;CL:0000075,3.64e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.11e-17;11!UBERON:0009497;5.24e-15;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;6.82e-13;1!DOID:1357;6.82e-13;1!DOID:7;4.77e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.82e-13,1;DOID:1357,6.82e-13,1;DOID:7,1.53e-07,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001764;6.82e-13;1!UBERON:0001825;6.82e-13;1!UBERON:0002107;2.41e-10;19!UBERON:0006925;2.41e-10;19!UBERON:0002368;2.83e-08;33!UBERON:0002423;6.62e-08;25!UBERON:0000341;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.82e-13,1;UBERON:0001825,6.82e-13,1;UBERON:0002107,2.41e-10,19;UBERON:0006925,2.41e-10,19;UBERON:0008836,2.41e-10,19;UBERON:0008835,5.84e-09,22;UBERON:0003894,5.84e-09,22;UBERON:0009854,1.41e-08,23;UBERON:0002368,1.70e-08,35;UBERON:0007499,6.62e-08,25;UBERON:0009497,6.62e-08,25;UBERON:0000015,6.62e-08,25;UBERON:0002423,6.62e-08,25;UBERON:0006235,6.62e-08,25;UBERON:0004161,6.62e-08,25;UBERON:0009856,1.32e-07,26;UBERON:0003929,1.41e-07,54;UBERON:0000341,4.98e-07,2;UBERON:0002530,6.73e-07,59 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90493682876507,3.05590740446622,1.17217447210047,0,0.205654985406647,2.40274446275134,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.818999468447914,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0,0,0,1.26675244876796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0.353830258013357,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1342304102162,8.9812827830235,5.76911008668165,9.77351385885681,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22354542081276,0.156986185701028,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,31.0409415598605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1903221573187,0,0,0,0.25458863311266,10.3079766368692,0,0.342233301085281,0.404112318087525,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr7:130600673..130600688,+ | |short_description=p@chr7:130600673..130600688,+ | ||
}} | }} |
Latest revision as of 06:03, 31 July 2015
Short description: | p@chr7:130600673..130600688, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:130600673..130600688, + |
Coexpression cluster: | C3294_smallcell_hepatoblastoma_thyroid_hepatocellular_Melanocyte_liver_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.97e-19 | 10 |
melanoblast | 5.97e-19 | 10 |
light melanocyte | 1.88e-16 | 3 |
hepatocyte | 3.11e-16 | 12 |
pigment cell | 1.27e-13 | 14 |
dark melanocyte | 4.23e-13 | 1 |
neurecto-epithelial cell | 1.31e-09 | 20 |
columnar/cuboidal epithelial cell | 3.64e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.82e-13 | 1 |
paranasal sinus | 6.82e-13 | 1 |
liver | 2.41e-10 | 19 |
digestive gland | 2.41e-10 | 19 |
liver bud | 2.41e-10 | 19 |
hepatic diverticulum | 5.84e-09 | 22 |
liver primordium | 5.84e-09 | 22 |
digestive tract diverticulum | 1.41e-08 | 23 |
endocrine gland | 1.70e-08 | 35 |
epithelial sac | 6.62e-08 | 25 |
epithelium of foregut-midgut junction | 6.62e-08 | 25 |
anatomical boundary | 6.62e-08 | 25 |
hepatobiliary system | 6.62e-08 | 25 |
foregut-midgut junction | 6.62e-08 | 25 |
septum transversum | 6.62e-08 | 25 |
sac | 1.32e-07 | 26 |
gut epithelium | 1.41e-07 | 54 |
throat | 4.98e-07 | 2 |
gland | 6.73e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.82e-13 | 1 |
maxillary sinus cancer | 6.82e-13 | 1 |
disease of anatomical entity | 1.53e-07 | 39 |