FFCP PHASE1:Hg19::chr7:134653623..134653707,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:134653623..134653707,+ | |||
|coexpression_cluster_id=C320 | |||
|description=CAGE_peak_at_chr7:134653623..134653707,+ | |description=CAGE_peak_at_chr7:134653623..134653707,+ | ||
|id=chr7:134653623..134653707,+ | |id=chr7:134653623..134653707,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.83e-17!180;CL:0000057!1.31e-09!75;CL:0000680!9.14e-08!57;CL:0000056!9.14e-08!57;CL:0000355!9.14e-08!57;CL:0000187!3.55e-07!54;CL:0000393!7.38e-07!60;CL:0000211!7.38e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.83e-17!180;CL:0000057!1.31e-09!75;CL:0000680!9.14e-08!57;CL:0000056!9.14e-08!57;CL:0000355!9.14e-08!57;CL:0000187!3.55e-07!54;CL:0000393!7.38e-07!60;CL:0000211!7.38e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.21e-07;55!CL:0002334;5.28e-07;12!CL:0000723;9.35e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.50e-10,76;CL:0000680,1.30e-07,58;CL:0000056,1.30e-07,58;CL:0000355,1.30e-07,58;CL:0000187,3.14e-07,55;CL:0002334,8.84e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.54e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.06e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.71e-10!659;UBERON:0000475!1.45e-09!365;UBERON:0000914!4.38e-09!83;UBERON:0002329!4.38e-09!83;UBERON:0003077!4.38e-09!83;UBERON:0003059!4.38e-09!83;UBERON:0007282!4.38e-09!83;UBERON:0009618!4.38e-09!83;UBERON:0007285!4.38e-09!83;UBERON:0005256!2.51e-08!143;UBERON:0000486!3.34e-08!82;UBERON:0002385!5.84e-08!63;UBERON:0001015!5.84e-08!63;UBERON:0000383!5.84e-08!63;UBERON:0000481!5.94e-08!347;UBERON:0001134!1.22e-07!61;UBERON:0002036!1.22e-07!61;UBERON:0003082!1.22e-07!61;UBERON:0004290!2.22e-07!70;UBERON:0003102!2.95e-07!95;UBERON:0000467!3.38e-07!625;UBERON:0000480!4.92e-07!626;UBERON:0002100!5.69e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.13e-08;9!UBERON:0000042;1.13e-08;9!UBERON:0003688;3.94e-07;6!UBERON:0002358;3.94e-07;6!UBERON:0003684;3.94e-07;6!UBERON:0001178;3.94e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.88e-08,122;UBERON:0002385,7.94e-08,64;UBERON:0001015,7.94e-08,64;UBERON:0000383,7.94e-08,64;UBERON:0000486,1.18e-07,83;UBERON:0001134,1.49e-07,62;UBERON:0002036,1.49e-07,62;UBERON:0003082,1.49e-07,62;UBERON:0007524,1.65e-07,73;UBERON:0002329,2.73e-07,71;UBERON:0003059,2.73e-07,71;UBERON:0007282,2.73e-07,71;UBERON:0004290,2.73e-07,71;UBERON:0009618,2.73e-07,71;UBERON:0003688,4.01e-07,6;UBERON:0002358,4.01e-07,6;UBERON:0003684,4.01e-07,6;UBERON:0001178,4.01e-07,6;UBERON:0003104,4.77e-07,160;UBERON:0009142,4.77e-07,160;UBERON:0003077,4.77e-07,72;UBERON:0007285,4.77e-07,72 | |||
|phase1_expression=4.36028110249336,7.27941781229343,4.93340414335899,15.0109947529696,8.04529969969118,28.7871712953122,2.53299878168311,0.631719873426831,0.783556884599516,0.245733936501509,0,0.218441372130172,1.31883489114227,0.37129905888014,0.662794751455832,9.41255205032485,6.02694528023977,5.84248072309899,6.8310591830671,0.369363174230364,0,0.626909442956176,2.86235987131057,1.77936752594749,3.01302335027527,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.53435074212236,1.0843174571537,1.50401373190767,4.20054904986389,0.795285947051099,1.45990461090791,1.51255707462509,1.10864698731282,1.93236528524877,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.825354125820202,0.626984899610432,0.258416759169329,1.77883131343355,0.33472061276467,0,0,1.46437234528902,0.735326160691737,0.81014194788176,0.357198913136319,0.898117490504679,0.900891843866578,0,0,0.549605231791222,0,0,0,21.866765874594,1.2663051166458,1.72131935057184,2.86836620748814,1.77334191099179,2.80338800071154,3.20246987189115,4.9333509683432,0.311211035399766,0.808264032418128,0.326923806226917,0.454072282934794,3.45705554687999,0,2.18512053781224,0,0.298897361103602,0,0.485618833104395,0.421352420106746,0.204154171254893,0.859840221182376,0.309977343527296,2.37600571456411,8.90160945402805,0,0,0.336672227908132,0.750711119231785,0,3.07284334616587,6.74273150757843,6.30999847407706,1.02088964844019,6.45802688479903,3.41691822109708,3.39091041855299,3.30100205692843,1.33968288009971,9.27505944164265,6.88632368426882,0.675105328965065,1.65642908774038,3.02920529092937,1.74894807420369,0.969876340912871,8.87523981291536,1.91428986632517,1.18692414617341,1.15956511897978,1.63647672354501,0.286804595389004,0.243947412259191,0.132529768321485,0.232387885739037,0.932949495138334,0.252320850875628,0.72995471815166,3.12899064659632,18.0107462694008,0,1.85747171212792,3.60939740834793,0.591534000199219,0.842923450390509,0.482022059766964,0.882351781859152,0.217879444092406,0,0.404493924480493,0,0.38474715694639,0,0,0,0,6.33775174109154,0,1.18157981336281,0,0.368965315629341,1.20097467208968,0.878002283269004,0,1.00528972411631,0.555530670951178,0,0,4.3299402607582,0.463721619900307,2.46558257895225,0.144366447761074,1.38895653772983,3.23432058798817,0,0,0,0,0,0.93733833986777,2.18376766658517,1.55952606966625,0.53735113621709,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0,0.317489471460845,0,0,0,0.514137463516618,0.300343057843917,0.571652865261156,0,0,0.8800594298514,3.49033632546,0,1.690605505112,10.9034627799797,12.4808924293639,0,0,0.799266537048298,1.85871391755592,2.17048642156577,0,0.325736184293735,1.06617584622764,0.791951872933429,1.50719688529793,0.871533458600294,9.9972991182057,0,0,0,2.39624855491583,2.29723871668228,1.42636905040718,2.02693829334611,1.64381058040307,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.736148950314839,3.00102312635806,0.813795071099207,23.2927364914504,18.9134728124991,12.143085957613,17.571212248907,0.902838299183157,0,0,2.65690239414175,3.31864503375066,1.04260337361699,0.195801157462741,0,0,0,0,0.303127571446259,0,0.604780586659361,4.46594054073798,7.82656063769118,7.29716245525991,6.79137491055215,8.18731598506726,16.5679538777916,5.93672265779964,2.00472601943452,2.13074070375753,0.9033987161519,0.519254429183621,1.16210378459959,0,2.80709058424599,1.65745780084613,1.49258782613989,2.1850940160806,1.96686622439136,0,0.462092022626489,0,0,0.422206515571503,0,0,7.34114114747274,0,0,0.501689773854853,0,0,0.671624264166535,0,0,0.512900250232778,0,0.650756789328606,0.618246069886334,1.00726411300178,0.330037999682352,0,0,3.21367859688319,0.386682873168488,0.616194468458578,0.614014698904518,0.275673144969061,2.36324538710202,1.59518363305651,1.27839941124151,1.51354460599453,0.495854746082934,1.92190067365106,0.382838137483752,0.910420027699949,6.04299214086472,1.25924938732256,0,0.308033580176089,0,0,1.11194531462352,1.5743737541619,0.372158369359667,3.48017367190598,3.43134349062885,0,6.84702380854273,0,0.78494864019923,1.79872457583315,1.37268514868027,1.17812402345686,0.202182481573316,6.34041284692033,0.842516912477962,0.48763373908959,2.19342140668156,1.05650146756755,1.63799893689583,4.80778468642623,2.26016233240486,0,1.99031692572366,3.94605796728386,1.15755106853338,1.9676842561399,0.608731130888112,1.54911749049875,0.563391205064483,0.860468113224309,1.27723753317057,1.07001315444375,0.354761064070598,3.16661452946496,3.62224382255892,0,0.349934720244983,0.192444225451024,0,0,0.753150406214233,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.2387444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| ||
|short_description=p@chr7:134653623..134653707,+ | |short_description=p@chr7:134653623..134653707,+ | ||
}} | }} |
Latest revision as of 06:21, 31 July 2015
Short description: | p@chr7:134653623..134653707, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:134653623..134653707, + |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.50e-10 | 76 |
muscle precursor cell | 1.30e-07 | 58 |
myoblast | 1.30e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.30e-07 | 58 |
muscle cell | 3.14e-07 | 55 |
preadipocyte | 8.84e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 2.88e-08 | 122 |
muscle tissue | 7.94e-08 | 64 |
musculature | 7.94e-08 | 64 |
musculature of body | 7.94e-08 | 64 |
multilaminar epithelium | 1.18e-07 | 83 |
skeletal muscle tissue | 1.49e-07 | 62 |
striated muscle tissue | 1.49e-07 | 62 |
myotome | 1.49e-07 | 62 |
dense mesenchyme tissue | 1.65e-07 | 73 |
somite | 2.73e-07 | 71 |
presomitic mesoderm | 2.73e-07 | 71 |
presumptive segmental plate | 2.73e-07 | 71 |
dermomyotome | 2.73e-07 | 71 |
trunk paraxial mesoderm | 2.73e-07 | 71 |
omentum | 4.01e-07 | 6 |
peritoneum | 4.01e-07 | 6 |
abdominal cavity | 4.01e-07 | 6 |
visceral peritoneum | 4.01e-07 | 6 |
mesenchyme | 4.77e-07 | 160 |
entire embryonic mesenchyme | 4.77e-07 | 160 |
paraxial mesoderm | 4.77e-07 | 72 |
presumptive paraxial mesoderm | 4.77e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.06e-07 | 14 |