FFCP PHASE1:Hg19::chr7:192249..192264,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:192249..192264,+ to FFCP PHASE1:Hg19::chr7:192249..192264,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:192249..192264,+ | |||
|coexpression_cluster_id=C4671 | |||
|description=CAGE_peak_at_chr7:192249..192264,+ | |||
|id=chr7:192249..192264,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.34e-19!180;CL:0000133!5.15e-11!59;CL:0002319!1.08e-09!25;CL:0000057!8.71e-09!75;CL:0000333!1.11e-07!41;CL:0000188!1.76e-07!9;CL:0000221!5.50e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000188;3.58e-15;9!CL:0000128;2.31e-12;7!CL:0000126;2.31e-12;7!CL:0000127;2.31e-12;7!CL:0002321;2.71e-10;15!CL:0002319;1.71e-09;25!CL:0002603;1.37e-08;3!CL:0000243;8.64e-08;15!CL:0000125;8.64e-08;15!CL:0002605;1.09e-07;3!CL:0000708;1.09e-07;3!CL:0002322;1.14e-07;5!CL:0000095;8.41e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.03e-15,9;CL:0000128,3.53e-12,7;CL:0000126,3.53e-12,7;CL:0000127,3.53e-12,7;CL:0002453,3.53e-12,7;CL:0002319,1.22e-09,25;CL:0000133,1.24e-09,59;CL:0002603,1.40e-08,3;CL:0000333,1.65e-08,41;CL:0000708,5.44e-08,3;CL:0000243,9.58e-08,15;CL:0000125,9.58e-08,15;CL:0000030,9.58e-08,15;CL:0000339,9.58e-08,15;CL:0002322,1.60e-07,5;CL:0002605,1.75e-07,3;CL:0000393,2.90e-07,61;CL:0000211,2.90e-07,61;CL:0000221,4.57e-07,72;CL:0000095,9.20e-07,17;CL:0000123,9.20e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;8.64e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.71e-12!169;UBERON:0000073!7.61e-12!94;UBERON:0001016!7.61e-12!94;UBERON:0000924!2.16e-11!173;UBERON:0006601!2.16e-11!173;UBERON:0005743!2.27e-10!86;UBERON:0001017!3.70e-10!82;UBERON:0000475!1.48e-09!365;UBERON:0003075!7.04e-09!86;UBERON:0007284!7.04e-09!86;UBERON:0000033!5.69e-08!123;UBERON:0002346!5.76e-08!90;UBERON:0000153!9.80e-08!129;UBERON:0007811!9.80e-08!129;UBERON:0000955!8.19e-07!69;UBERON:0006238!8.19e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.38e-10;16!UBERON:0002036;8.38e-10;16!UBERON:0003210;1.09e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,5.44e-08,3 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,1.74467704820074,0,2.52687949370732,0.522371256399677,0.737201809504527,0,0.218441372130172,0,0.618831764800233,0.994192127183747,0,0,0.730310090387373,0,7.1410213684537,7.75202626728161,10.3440058087769,2.28988789704845,4.37998160233229,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.515151135268373,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0.722878304769133,0.50133791063589,0.144846518960824,2.3858578411533,0.486634870302636,0.850813354476611,1.33037638477538,0.614843499851882,0.458426764241994,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0.633152558322899,0.132409180813219,0.573673241497627,0.709336764396714,0.560677600142307,0,1.2333377420858,0.622422070799533,0,1.14423332179421,1.66493170409425,0.576175924479999,0.70296429550139,0.312160076830321,0,0.597794722207204,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,1.47401180774122,0.516628905878827,1.18800285728205,0.494533858557114,0,0,1.0100166837244,0.500474079487857,0.554128230968366,0.877955241761676,0,2.40380894250555,0,0.538168907066586,0.213557388818567,0.847727604638247,1.20036438433761,0.309157587715317,0,0.558350568994769,1.18143432568886,0.487185025805993,0,0.736399189138395,0.484938170456436,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0,2.07355300420312,2.12047629314376,1.16193942869518,0.932949495138334,2.77552935963191,1.09493207722749,0,5.78916844373597,5.52539685409922,0.464367928031979,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,3.08822058537346,0,0,0,0,0.325808305310325,0,1.44331342025273,0.927443239800615,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.414656231081544,0.432359860250884,0.12624243342638,0.317489471460845,0,0,1.71072446022705,0.411309970813294,0,0,2.80327710863402,4.79556075716608,1.68678057388185,0.387815147273333,0,0,0.26593811658487,2.08014873822732,2.05765899409714,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,2.85273810081437,0.144781306667579,1.02738161275192,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,1.30139853857622,0.773288812777695,1.34013012267479,1.91381625495949,0,0,0,1.2269149171914,3.50119364741774,0.271265023699736,0.623912584592421,0.178428988797162,0,0.468565659970853,0.601892199455438,0,0,0,0.921845842708516,0.0868836144680828,2.15381273209015,2.40200396667599,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.640695746278505,1.02341449813341,0.321707842287215,1.48418066444991,0.308419387605311,1.06537035187876,0.246381468041427,0,1.85936605535935,0.362578348774867,0.40101294060657,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,3.51182841698397,0.254876273045038,0,0.671624264166535,0,0,0.256450125116389,0.984043937099117,0,0.412164046590889,0,0,0,0,0,1.93341436584244,2.61882649094895,3.99109554287937,1.37836572484531,0.751941714077915,1.0151168573996,2.38634556765083,2.67096106940212,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,2.303080121802,2.1396949401696,1.27281299170375,0,0,0,0,0.808729926293264,0,0.421258456238981,1.95053495635836,0,0,0.409499734223957,0,1.13008116620243,2.75682671773062,0.66343897524122,0,0.578775534266688,1.31178950409327,0,0.30982349809975,0.281695602532241,0.430234056612155,0.392996164052485,0,0.354761064070598,0.844430541190656,0.329294892959902,1.13841952129715,2.44954304171488,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0.890469640183247,0,0.211125408127993,0.597743964753209,0,0,0.409074730008619,0,0,0,0,0,0.591860433821602,0,0,0,0.463840490809256,1.99613798001194,0,0,1.44999915086959,0.1137934482855,0,0.236387681767936,0.344743373241465,0,0.694499979733169,0,0.723578631752448,0,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0.692552326534174,0.569710279235006,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0.123563938946503,0,0.539209063845416,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0.207376382794494,1.99396161812156,1.323967823502,0.627865836814451,0,0,0.416024019039416,0,0,0.34823682632161,0.1747266682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| ||
|short_description=p@chr7:192249..192264,+ | |||
}} | }} |
Latest revision as of 08:17, 31 July 2015
Short description: | p@chr7:192249..192264, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:192249..192264, + |
Coexpression cluster: | C4671_Astrocyte_Meningeal_Hair_Pericytes_Skeletal_glioblastoma_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.03e-15 | 9 |
oligodendrocyte | 3.53e-12 | 7 |
macroglial cell | 3.53e-12 | 7 |
astrocyte | 3.53e-12 | 7 |
oligodendrocyte precursor cell | 3.53e-12 | 7 |
neural cell | 1.22e-09 | 25 |
neurectodermal cell | 1.24e-09 | 59 |
astrocyte of the cerebellum | 1.40e-08 | 3 |
migratory neural crest cell | 1.65e-08 | 41 |
leptomeningeal cell | 5.44e-08 | 3 |
glial cell (sensu Vertebrata) | 9.58e-08 | 15 |
glial cell | 9.58e-08 | 15 |
glioblast | 9.58e-08 | 15 |
glioblast (sensu Vertebrata) | 9.58e-08 | 15 |
embryonic stem cell | 1.60e-07 | 5 |
astrocyte of the cerebral cortex | 1.75e-07 | 3 |
electrically responsive cell | 2.90e-07 | 61 |
electrically active cell | 2.90e-07 | 61 |
ectodermal cell | 4.57e-07 | 72 |
neuron associated cell | 9.20e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.20e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 5.44e-08 | 3 |