FFCP PHASE1:Hg19::chr7:5466443..5466459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:5466443..5466459,+ | |||
|description=CAGE_peak_at_chr7:5466443..5466459,+ | |description=CAGE_peak_at_chr7:5466443..5466459,+ | ||
|id=chr7:5466443..5466459,+ | |id=chr7:5466443..5466459,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;4.60e-23;3!CL:0002543;5.68e-12;6!CL:0002567;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.12e-23,3;CL:0002543,5.08e-12,6;CL:0002567,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.10e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.33e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.28e-14!57;UBERON:0005068!4.28e-14!57;UBERON:0006241!4.28e-14!57;UBERON:0007135!4.28e-14!57;UBERON:0002616!3.67e-12!59;UBERON:0002780!1.77e-11!41;UBERON:0001890!1.77e-11!41;UBERON:0006240!1.77e-11!41;UBERON:0003080!5.17e-11!42;UBERON:0000955!7.43e-11!69;UBERON:0006238!7.43e-11!69;UBERON:0005743!1.11e-10!86;UBERON:0001017!2.38e-10!82;UBERON:0007023!2.53e-10!115;UBERON:0000073!1.40e-09!94;UBERON:0001016!1.40e-09!94;UBERON:0003075!1.83e-09!86;UBERON:0007284!1.83e-09!86;UBERON:0002346!4.47e-09!90;UBERON:0002020!2.89e-08!34;UBERON:0003528!2.89e-08!34;UBERON:0001893!6.05e-08!34;UBERON:0002791!1.30e-07!33;UBERON:0003056!3.33e-07!61;UBERON:0001869!5.02e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.45e-17;4!UBERON:0002037;3.26e-12;6!UBERON:0001905;1.64e-09;2!UBERON:0002757;1.64e-09;2!UBERON:0010134;1.64e-09;2!UBERON:0005408;1.64e-09;2!UBERON:0001899;1.64e-09;2!UBERON:0002680;1.90e-08;9!UBERON:0001895;1.90e-08;9!UBERON:0001638;2.75e-08;9!UBERON:0003920;2.75e-08;9!UBERON:0004582;2.75e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.33e-17,4;UBERON:0004340,1.33e-17,4;UBERON:0002037,3.64e-12,6;UBERON:0006215,3.64e-12,6;UBERON:0003124,1.77e-10,7;UBERON:0001905,1.86e-09,2;UBERON:0002757,1.86e-09,2;UBERON:0010134,1.86e-09,2;UBERON:0005408,1.86e-09,2;UBERON:0001899,1.86e-09,2;UBERON:0002680,2.05e-08,9;UBERON:0001895,2.05e-08,9;UBERON:0010092,2.05e-08,9;UBERON:0001638,2.55e-08,9;UBERON:0003920,2.55e-08,9;UBERON:0004582,2.55e-08,9 | |||
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| ||
|short_description=p@chr7:5466443..5466459,+ | |short_description=p@chr7:5466443..5466459,+ | ||
}} | }} |
Latest revision as of 10:45, 31 July 2015
Short description: | p@chr7:5466443..5466459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:5466443..5466459, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.12e-23 | 3 |
vein endothelial cell | 5.08e-12 | 6 |
light melanocyte | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.33e-17 | 4 |
allantois | 1.33e-17 | 4 |
cerebellum | 3.64e-12 | 6 |
rhombic lip | 3.64e-12 | 6 |
chorion | 1.77e-10 | 7 |
pineal body | 1.86e-09 | 2 |
regional part of epithalamus | 1.86e-09 | 2 |
secretory circumventricular organ | 1.86e-09 | 2 |
circumventricular organ | 1.86e-09 | 2 |
epithalamus | 1.86e-09 | 2 |
regional part of metencephalon | 2.05e-08 | 9 |
metencephalon | 2.05e-08 | 9 |
future metencephalon | 2.05e-08 | 9 |
vein | 2.55e-08 | 9 |
venous blood vessel | 2.55e-08 | 9 |
venous system | 2.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.33e-09 | 2 |