FFCP PHASE1:Hg19::chr7:5466443..5466459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:5466443..5466459,+ | |||
|description=CAGE_peak_at_chr7:5466443..5466459,+ | |description=CAGE_peak_at_chr7:5466443..5466459,+ | ||
|id=chr7:5466443..5466459,+ | |id=chr7:5466443..5466459,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;4.60e-23;3!CL:0002543;5.68e-12;6!CL:0002567;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.12e-23,3;CL:0002543,5.08e-12,6;CL:0002567,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.10e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.33e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.28e-14!57;UBERON:0005068!4.28e-14!57;UBERON:0006241!4.28e-14!57;UBERON:0007135!4.28e-14!57;UBERON:0002616!3.67e-12!59;UBERON:0002780!1.77e-11!41;UBERON:0001890!1.77e-11!41;UBERON:0006240!1.77e-11!41;UBERON:0003080!5.17e-11!42;UBERON:0000955!7.43e-11!69;UBERON:0006238!7.43e-11!69;UBERON:0005743!1.11e-10!86;UBERON:0001017!2.38e-10!82;UBERON:0007023!2.53e-10!115;UBERON:0000073!1.40e-09!94;UBERON:0001016!1.40e-09!94;UBERON:0003075!1.83e-09!86;UBERON:0007284!1.83e-09!86;UBERON:0002346!4.47e-09!90;UBERON:0002020!2.89e-08!34;UBERON:0003528!2.89e-08!34;UBERON:0001893!6.05e-08!34;UBERON:0002791!1.30e-07!33;UBERON:0003056!3.33e-07!61;UBERON:0001869!5.02e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!4.28e-14!57;UBERON:0005068!4.28e-14!57;UBERON:0006241!4.28e-14!57;UBERON:0007135!4.28e-14!57;UBERON:0002616!3.67e-12!59;UBERON:0002780!1.77e-11!41;UBERON:0001890!1.77e-11!41;UBERON:0006240!1.77e-11!41;UBERON:0003080!5.17e-11!42;UBERON:0000955!7.43e-11!69;UBERON:0006238!7.43e-11!69;UBERON:0005743!1.11e-10!86;UBERON:0001017!2.38e-10!82;UBERON:0007023!2.53e-10!115;UBERON:0000073!1.40e-09!94;UBERON:0001016!1.40e-09!94;UBERON:0003075!1.83e-09!86;UBERON:0007284!1.83e-09!86;UBERON:0002346!4.47e-09!90;UBERON:0002020!2.89e-08!34;UBERON:0003528!2.89e-08!34;UBERON:0001893!6.05e-08!34;UBERON:0002791!1.30e-07!33;UBERON:0003056!3.33e-07!61;UBERON:0001869!5.02e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.45e-17;4!UBERON:0002037;3.26e-12;6!UBERON:0001905;1.64e-09;2!UBERON:0002757;1.64e-09;2!UBERON:0010134;1.64e-09;2!UBERON:0005408;1.64e-09;2!UBERON:0001899;1.64e-09;2!UBERON:0002680;1.90e-08;9!UBERON:0001895;1.90e-08;9!UBERON:0001638;2.75e-08;9!UBERON:0003920;2.75e-08;9!UBERON:0004582;2.75e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.33e-17,4;UBERON:0004340,1.33e-17,4;UBERON:0002037,3.64e-12,6;UBERON:0006215,3.64e-12,6;UBERON:0003124,1.77e-10,7;UBERON:0001905,1.86e-09,2;UBERON:0002757,1.86e-09,2;UBERON:0010134,1.86e-09,2;UBERON:0005408,1.86e-09,2;UBERON:0001899,1.86e-09,2;UBERON:0002680,2.05e-08,9;UBERON:0001895,2.05e-08,9;UBERON:0010092,2.05e-08,9;UBERON:0001638,2.55e-08,9;UBERON:0003920,2.55e-08,9;UBERON:0004582,2.55e-08,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,2.84779697870439,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0.285826432630578,0,0.43596006883328,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,3.32870879020994,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.522870902049801,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,3.05163472634166,3.20679853800551,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0.146178634172371,0,0,0.176512253383001,0,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0.229073192331831,0.343189995723929,0.288109595976299,0.124252535565433,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0.669514372325618,0.134366944973453,0,0,0,0,0,0.295282444544246,0,0.795229689809303,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0.244052529803926,0.500763722825999,0,0.110929051536852,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0.252071696221718,0.414943514785307,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0,0,0,0,0,0,0.0675375846183947,0,0.826747186004736,0.253663240775627,0,0,0,0,0,1.07140367175657,0.672567444437648,0.606965604236632,0.227662191351298,0,0.115233987555779,0.171488009437418,0.271878931907327,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0.4582137370881,0.31020638566432,0,0.111855431797792,0,0,0.647428837187895,0.513314034281235,0,0,0.467878926924211,0.795803100645473,0,0.22589216407792,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0.561689566824178,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0.1266985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| |phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,2.84779697870439,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0.285826432630578,0,0.43596006883328,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,3.32870879020994,0,0.248107807818777,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.522870902049801,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,3.05163472634166,3.20679853800551,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0.146178634172371,0,0,0.176512253383001,0,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0.229073192331831,0.343189995723929,0.288109595976299,0.124252535565433,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0.669514372325618,0.134366944973453,0,0,0,0,0,0.295282444544246,0,0.795229689809303,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0.244052529803926,0.500763722825999,0,0.110929051536852,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0.252071696221718,0.414943514785307,0,0,0,0,0.183428598521679,0,0,0.690359926060101,0,0,0,0,0,0,0,0.0675375846183947,0,0.826747186004736,0.253663240775627,0,0,0,0,0,1.07140367175657,0.672567444437648,0.606965604236632,0.227662191351298,0,0.115233987555779,0.171488009437418,0.271878931907327,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0.4582137370881,0.31020638566432,0,0.111855431797792,0,0,0.647428837187895,0.513314034281235,0,0,0.467878926924211,0.795803100645473,0,0.22589216407792,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0.561689566824178,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0.1266985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| ||
|short_description=p@chr7:5466443..5466459,+ | |short_description=p@chr7:5466443..5466459,+ | ||
}} | }} |
Latest revision as of 10:45, 31 July 2015
Short description: | p@chr7:5466443..5466459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:5466443..5466459, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.12e-23 | 3 |
vein endothelial cell | 5.08e-12 | 6 |
light melanocyte | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.33e-17 | 4 |
allantois | 1.33e-17 | 4 |
cerebellum | 3.64e-12 | 6 |
rhombic lip | 3.64e-12 | 6 |
chorion | 1.77e-10 | 7 |
pineal body | 1.86e-09 | 2 |
regional part of epithalamus | 1.86e-09 | 2 |
secretory circumventricular organ | 1.86e-09 | 2 |
circumventricular organ | 1.86e-09 | 2 |
epithalamus | 1.86e-09 | 2 |
regional part of metencephalon | 2.05e-08 | 9 |
metencephalon | 2.05e-08 | 9 |
future metencephalon | 2.05e-08 | 9 |
vein | 2.55e-08 | 9 |
venous blood vessel | 2.55e-08 | 9 |
venous system | 2.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.33e-09 | 2 |