FFCP PHASE1:Hg19::chr7:64035065..64035085,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003ttc.1_5end | |association_with_transcript=0bp_to_uc003ttc.1_5end | ||
|cluster_id=chr7:64035065..64035085,+ | |||
|coexpression_cluster_id=C4691 | |coexpression_cluster_id=C4691 | ||
|description=CAGE_peak_1_at_uc003ttc.1_5end | |description=CAGE_peak_1_at_uc003ttc.1_5end | ||
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|ontology_enrichment_celltype=CL:1000449!1.04e-09!16;CL:1000497!1.77e-09!18;CL:0002518!1.77e-09!18;CL:1000507!5.05e-09!12;CL:1000494!5.05e-09!12;CL:0002681!9.03e-08!13;CL:0002584!9.03e-08!13;CL:0002319!7.02e-07!25 | |ontology_enrichment_celltype=CL:1000449!1.04e-09!16;CL:1000497!1.77e-09!18;CL:0002518!1.77e-09!18;CL:1000507!5.05e-09!12;CL:1000494!5.05e-09!12;CL:0002681!9.03e-08!13;CL:0002584!9.03e-08!13;CL:0002319!7.02e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:1000497;8.42e-16;17!CL:0002518;8.42e-16;17!CL:1000449;8.68e-16;15!CL:1000507;2.19e-13;10!CL:1000494;2.19e-13;10!CL:0002681;1.39e-12;12!CL:0002584;1.39e-12;12!CL:0002319;5.93e-09;25!CL:0000128;4.90e-08;7!CL:0000126;4.90e-08;7!CL:0000127;4.90e-08;7!CL:0000095;5.51e-08;17 | |ontology_enrichment_celltype_v019=CL:1000497;8.42e-16;17!CL:0002518;8.42e-16;17!CL:1000449;8.68e-16;15!CL:1000507;2.19e-13;10!CL:1000494;2.19e-13;10!CL:0002681;1.39e-12;12!CL:0002584;1.39e-12;12!CL:0002319;5.93e-09;25!CL:0000128;4.90e-08;7!CL:0000126;4.90e-08;7!CL:0000127;4.90e-08;7!CL:0000095;5.51e-08;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,3.47e-16,15;CL:1000497,3.50e-16,17;CL:0002518,3.50e-16,17;CL:1000507,1.12e-13,10;CL:1000494,1.12e-13,10;CL:0002681,8.81e-13,12;CL:0002584,8.81e-13,12;CL:0002319,7.32e-09,25;CL:0002321,7.34e-09,250;CL:0000066,4.01e-08,253;CL:0000128,5.36e-08,7;CL:0000126,5.36e-08,7;CL:0000127,5.36e-08,7;CL:0002453,5.36e-08,7;CL:0000095,7.07e-08,17;CL:0000123,7.07e-08,17;CL:0000222,1.43e-07,121 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.08e-17!86;UBERON:0007284!1.08e-17!86;UBERON:0000153!3.01e-17!129;UBERON:0007811!3.01e-17!129;UBERON:0000033!4.60e-17!123;UBERON:0004121!8.49e-17!169;UBERON:0000119!1.44e-16!312;UBERON:0005743!7.61e-16!86;UBERON:0002346!7.65e-16!90;UBERON:0000924!1.29e-15!173;UBERON:0006601!1.29e-15!173;UBERON:0000483!1.69e-15!309;UBERON:0003056!3.81e-15!61;UBERON:0001017!2.90e-14!82;UBERON:0000481!3.77e-14!347;UBERON:0000475!1.04e-13!365;UBERON:0000073!1.91e-13!94;UBERON:0001016!1.91e-13!94;UBERON:0000955!2.25e-12!69;UBERON:0006238!2.25e-12!69;UBERON:0000064!3.46e-12!219;UBERON:0002616!1.51e-11!59;UBERON:0001049!5.61e-11!57;UBERON:0005068!5.61e-11!57;UBERON:0006241!5.61e-11!57;UBERON:0007135!5.61e-11!57;UBERON:0000477!5.21e-10!286;UBERON:0000019!7.84e-10!19;UBERON:0000047!7.84e-10!19;UBERON:0004088!7.84e-10!19;UBERON:0003072!7.84e-10!19;UBERON:0003071!7.84e-10!19;UBERON:0004128!7.84e-10!19;UBERON:0000970!8.48e-10!20;UBERON:0004211!1.04e-09!16;UBERON:0001285!1.04e-09!16;UBERON:0007684!1.04e-09!16;UBERON:0003220!1.04e-09!16;UBERON:0004208!1.04e-09!16;UBERON:0000020!2.10e-09!23;UBERON:0001456!4.71e-09!21;UBERON:0009773!5.05e-09!12;UBERON:0001231!5.05e-09!12;UBERON:0004810!5.05e-09!12;UBERON:0002104!5.60e-09!21;UBERON:0006555!9.22e-09!17;UBERON:0005103!9.22e-09!17;UBERON:0000083!9.22e-09!17;UBERON:0009201!9.22e-09!17;UBERON:0004819!9.22e-09!17;UBERON:0006553!9.22e-09!17;UBERON:0003074!9.22e-09!17;UBERON:0003060!9.22e-09!17;UBERON:0001032!1.10e-08!24;UBERON:0004456!1.10e-08!24;UBERON:0002780!4.66e-08!41;UBERON:0001890!4.66e-08!41;UBERON:0006240!4.66e-08!41;UBERON:0000080!6.25e-08!18;UBERON:0002120!6.25e-08!18;UBERON:0004875!6.25e-08!18;UBERON:0005721!6.25e-08!18;UBERON:0005754!6.25e-08!18;UBERON:0007297!6.25e-08!18;UBERON:0000025!6.88e-08!194;UBERON:0001893!7.94e-08!34;UBERON:0001225!9.03e-08!13;UBERON:0008987!9.03e-08!13;UBERON:0000353!1.08e-07!17;UBERON:0002791!1.13e-07!33;UBERON:0003080!1.24e-07!42;UBERON:0002020!1.54e-07!34;UBERON:0003528!1.54e-07!34;UBERON:0001869!1.55e-07!32;UBERON:0004111!1.58e-07!241;UBERON:0002050!1.65e-07!605;UBERON:0005423!1.65e-07!605;UBERON:0004876!2.16e-07!20;UBERON:0000467!2.52e-07!625;UBERON:0001801!2.75e-07!14;UBERON:0005085!2.81e-07!29;UBERON:0000923!2.95e-07!604;UBERON:0005291!2.95e-07!604;UBERON:0006598!2.95e-07!604;UBERON:0002532!2.95e-07!604;UBERON:0000922!2.97e-07!612;UBERON:0000480!3.30e-07!626;UBERON:0001444!4.90e-07!48;UBERON:0000062!6.55e-07!511;UBERON:0001851!9.43e-07!16 | |ontology_enrichment_uberon=UBERON:0003075!1.08e-17!86;UBERON:0007284!1.08e-17!86;UBERON:0000153!3.01e-17!129;UBERON:0007811!3.01e-17!129;UBERON:0000033!4.60e-17!123;UBERON:0004121!8.49e-17!169;UBERON:0000119!1.44e-16!312;UBERON:0005743!7.61e-16!86;UBERON:0002346!7.65e-16!90;UBERON:0000924!1.29e-15!173;UBERON:0006601!1.29e-15!173;UBERON:0000483!1.69e-15!309;UBERON:0003056!3.81e-15!61;UBERON:0001017!2.90e-14!82;UBERON:0000481!3.77e-14!347;UBERON:0000475!1.04e-13!365;UBERON:0000073!1.91e-13!94;UBERON:0001016!1.91e-13!94;UBERON:0000955!2.25e-12!69;UBERON:0006238!2.25e-12!69;UBERON:0000064!3.46e-12!219;UBERON:0002616!1.51e-11!59;UBERON:0001049!5.61e-11!57;UBERON:0005068!5.61e-11!57;UBERON:0006241!5.61e-11!57;UBERON:0007135!5.61e-11!57;UBERON:0000477!5.21e-10!286;UBERON:0000019!7.84e-10!19;UBERON:0000047!7.84e-10!19;UBERON:0004088!7.84e-10!19;UBERON:0003072!7.84e-10!19;UBERON:0003071!7.84e-10!19;UBERON:0004128!7.84e-10!19;UBERON:0000970!8.48e-10!20;UBERON:0004211!1.04e-09!16;UBERON:0001285!1.04e-09!16;UBERON:0007684!1.04e-09!16;UBERON:0003220!1.04e-09!16;UBERON:0004208!1.04e-09!16;UBERON:0000020!2.10e-09!23;UBERON:0001456!4.71e-09!21;UBERON:0009773!5.05e-09!12;UBERON:0001231!5.05e-09!12;UBERON:0004810!5.05e-09!12;UBERON:0002104!5.60e-09!21;UBERON:0006555!9.22e-09!17;UBERON:0005103!9.22e-09!17;UBERON:0000083!9.22e-09!17;UBERON:0009201!9.22e-09!17;UBERON:0004819!9.22e-09!17;UBERON:0006553!9.22e-09!17;UBERON:0003074!9.22e-09!17;UBERON:0003060!9.22e-09!17;UBERON:0001032!1.10e-08!24;UBERON:0004456!1.10e-08!24;UBERON:0002780!4.66e-08!41;UBERON:0001890!4.66e-08!41;UBERON:0006240!4.66e-08!41;UBERON:0000080!6.25e-08!18;UBERON:0002120!6.25e-08!18;UBERON:0004875!6.25e-08!18;UBERON:0005721!6.25e-08!18;UBERON:0005754!6.25e-08!18;UBERON:0007297!6.25e-08!18;UBERON:0000025!6.88e-08!194;UBERON:0001893!7.94e-08!34;UBERON:0001225!9.03e-08!13;UBERON:0008987!9.03e-08!13;UBERON:0000353!1.08e-07!17;UBERON:0002791!1.13e-07!33;UBERON:0003080!1.24e-07!42;UBERON:0002020!1.54e-07!34;UBERON:0003528!1.54e-07!34;UBERON:0001869!1.55e-07!32;UBERON:0004111!1.58e-07!241;UBERON:0002050!1.65e-07!605;UBERON:0005423!1.65e-07!605;UBERON:0004876!2.16e-07!20;UBERON:0000467!2.52e-07!625;UBERON:0001801!2.75e-07!14;UBERON:0005085!2.81e-07!29;UBERON:0000923!2.95e-07!604;UBERON:0005291!2.95e-07!604;UBERON:0006598!2.95e-07!604;UBERON:0002532!2.95e-07!604;UBERON:0000922!2.97e-07!612;UBERON:0000480!3.30e-07!626;UBERON:0001444!4.90e-07!48;UBERON:0000062!6.55e-07!511;UBERON:0001851!9.43e-07!16 | ||
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| ||
|short_description=p1@uc003ttc.1 | |short_description=p1@uc003ttc.1 | ||
}} | }} |
Latest revision as of 11:03, 31 July 2015
Short description: | p1@uc003ttc.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003ttc.1_5end |
Coexpression cluster: | C4691_teratocarcinoma_carcinoid_merkel_retinoblastoma_testicular_carcinosarcoma_small |
Association with transcript: | 0bp_to_uc003ttc.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 3.47e-16 | 15 |
kidney cell | 3.50e-16 | 17 |
kidney epithelial cell | 3.50e-16 | 17 |
kidney tubule cell | 1.12e-13 | 10 |
nephron tubule epithelial cell | 1.12e-13 | 10 |
kidney cortical cell | 8.81e-13 | 12 |
renal cortical epithelial cell | 8.81e-13 | 12 |
neural cell | 7.32e-09 | 25 |
embryonic cell | 7.34e-09 | 250 |
epithelial cell | 4.01e-08 | 253 |
oligodendrocyte | 5.36e-08 | 7 |
macroglial cell | 5.36e-08 | 7 |
astrocyte | 5.36e-08 | 7 |
oligodendrocyte precursor cell | 5.36e-08 | 7 |
neuron associated cell | 7.07e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 7.07e-08 | 17 |
mesodermal cell | 1.43e-07 | 121 |