FFCP PHASE1:Hg19::chr7:64035065..64035085,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:64035065..64035085,+
|short_description=p1@uc003ttc.1
|description=CAGE_peak_1_at_uc003ttc.1_5end
|association_with_transcript=0bp_to_uc003ttc.1_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003ttc.1_5end | |||
|cluster_id=chr7:64035065..64035085,+ | |||
|coexpression_cluster_id=C4691 | |||
|description=CAGE_peak_1_at_uc003ttc.1_5end | |||
|id=chr7:64035065..64035085,+ | |||
|ontology_enrichment_celltype=CL:1000449!1.04e-09!16;CL:1000497!1.77e-09!18;CL:0002518!1.77e-09!18;CL:1000507!5.05e-09!12;CL:1000494!5.05e-09!12;CL:0002681!9.03e-08!13;CL:0002584!9.03e-08!13;CL:0002319!7.02e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:1000497;8.42e-16;17!CL:0002518;8.42e-16;17!CL:1000449;8.68e-16;15!CL:1000507;2.19e-13;10!CL:1000494;2.19e-13;10!CL:0002681;1.39e-12;12!CL:0002584;1.39e-12;12!CL:0002319;5.93e-09;25!CL:0000128;4.90e-08;7!CL:0000126;4.90e-08;7!CL:0000127;4.90e-08;7!CL:0000095;5.51e-08;17 | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@uc003ttc.1 | |||
}} | }} |
Latest revision as of 11:03, 31 July 2015
Short description: | p1@uc003ttc.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003ttc.1_5end |
Coexpression cluster: | C4691_teratocarcinoma_carcinoid_merkel_retinoblastoma_testicular_carcinosarcoma_small |
Association with transcript: | 0bp_to_uc003ttc.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 3.47e-16 | 15 |
kidney cell | 3.50e-16 | 17 |
kidney epithelial cell | 3.50e-16 | 17 |
kidney tubule cell | 1.12e-13 | 10 |
nephron tubule epithelial cell | 1.12e-13 | 10 |
kidney cortical cell | 8.81e-13 | 12 |
renal cortical epithelial cell | 8.81e-13 | 12 |
neural cell | 7.32e-09 | 25 |
embryonic cell | 7.34e-09 | 250 |
epithelial cell | 4.01e-08 | 253 |
oligodendrocyte | 5.36e-08 | 7 |
macroglial cell | 5.36e-08 | 7 |
astrocyte | 5.36e-08 | 7 |
oligodendrocyte precursor cell | 5.36e-08 | 7 |
neuron associated cell | 7.07e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 7.07e-08 | 17 |
mesodermal cell | 1.43e-07 | 121 |