FFCP PHASE1:Hg19::chr8:21939481..21939497,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr8:21939481..21939497,+ to FFCP PHASE1:Hg19::chr8:21939481..21939497,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:21939481..21939497,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr8:21939481..21939497,+ | |||
|id=chr8:21939481..21939497,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000746;3.67e-07;7!CL:1000612;3.67e-07;7!CL:0000764;9.27e-07;2!CL:0000650;9.27e-07;2!CL:1000500;9.27e-07;2!CL:1000618;9.27e-07;2!CL:1001318;9.27e-07;2!CL:0002173;9.27e-07;2!CL:0000558;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,4.04e-07,7;CL:1000612,4.04e-07,7;CL:0000764,7.61e-07,2;CL:0000765,7.61e-07,2;CL:0000050,7.61e-07,2;CL:0000038,7.61e-07,2;CL:0000558,7.61e-07,2;CL:0000547,7.61e-07,2;CL:0000549,7.61e-07,2;CL:0000550,7.61e-07,2;CL:0000552,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.40e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-47!115;UBERON:0001049!3.83e-26!57;UBERON:0005068!3.83e-26!57;UBERON:0006241!3.83e-26!57;UBERON:0007135!3.83e-26!57;UBERON:0001869!1.44e-23!32;UBERON:0001893!1.47e-23!34;UBERON:0002780!1.53e-23!41;UBERON:0001890!1.53e-23!41;UBERON:0006240!1.53e-23!41;UBERON:0002020!2.68e-23!34;UBERON:0003528!2.68e-23!34;UBERON:0003080!8.97e-23!42;UBERON:0002791!2.22e-22!33;UBERON:0002616!1.27e-21!59;UBERON:0000955!1.15e-20!69;UBERON:0006238!1.15e-20!69;UBERON:0001017!2.58e-20!82;UBERON:0002619!2.62e-20!22;UBERON:0005743!4.81e-20!86;UBERON:0002346!8.19e-20!90;UBERON:0003075!5.56e-19!86;UBERON:0007284!5.56e-19!86;UBERON:0000073!6.19e-19!94;UBERON:0001016!6.19e-19!94;UBERON:0001950!1.13e-17!20;UBERON:0000956!2.87e-17!25;UBERON:0000203!2.87e-17!25;UBERON:0003056!2.48e-15!61;UBERON:0000178!9.96e-12!15;UBERON:0000179!9.96e-12!15;UBERON:0000463!9.96e-12!15;UBERON:0000153!3.34e-11!129;UBERON:0007811!3.34e-11!129;UBERON:0000200!1.61e-10!6;UBERON:0002420!1.83e-10!9;UBERON:0007245!1.83e-10!9;UBERON:0010009!1.83e-10!9;UBERON:0010011!1.83e-10!9;UBERON:0000454!1.83e-10!9;UBERON:0000033!2.59e-10!123;UBERON:0000924!7.42e-10!173;UBERON:0006601!7.42e-10!173;UBERON:0004121!3.27e-09!169;UBERON:0000349!1.18e-08!5;UBERON:0001871!1.05e-07!7;UBERON:0009663!1.18e-07!7;UBERON:0002308!1.76e-07!9;UBERON:0000125!1.76e-07!9;UBERON:0000369!8.57e-07!4;UBERON:0002435!8.57e-07!4;UBERON:0000204!8.57e-07!4;UBERON:0010082!8.57e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.19e-26;15!UBERON:0000179;1.19e-26;15!UBERON:0000463;1.19e-26;15!UBERON:0001871;7.37e-15;6!UBERON:0001950;4.04e-13;20!UBERON:0002581;2.91e-12;1!UBERON:0002619;5.66e-12;22!UBERON:0002390;1.27e-11;32!UBERON:0000956;1.39e-10;25!UBERON:0000203;1.39e-10;25!UBERON:0000200;2.13e-08;6!UBERON:0001869;2.55e-08;32!UBERON:0002193;3.71e-08;42!UBERON:0001893;6.04e-08;34!UBERON:0002791;8.66e-08;32!UBERON:0000074;3.67e-07;7!UBERON:0001229;3.67e-07;7!UBERON:0002771;4.82e-07;2!UBERON:0003528;6.14e-07;34!UBERON:0002020;6.14e-07;34!UBERON:0001876;9.27e-07;2!UBERON:0003567;9.27e-07;2!UBERON:0003838;9.27e-07;2!UBERON:0003586;9.27e-07;2!UBERON:0005169;9.27e-07;2!UBERON:0002321;9.27e-07;2!UBERON:0005215;9.27e-07;2!UBERON:0002303;9.27e-07;2!UBERON:0002319;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.40e-26,15;UBERON:0000179,1.40e-26,15;UBERON:0000463,1.40e-26,15;UBERON:0007023,3.71e-17,114;UBERON:0001871,7.03e-15,6;UBERON:0001950,4.09e-13,20;UBERON:0002581,3.45e-12,1;UBERON:0002619,5.73e-12,22;UBERON:0000956,1.41e-10,25;UBERON:0000203,1.41e-10,25;UBERON:0000200,2.25e-08,6;UBERON:0002791,2.60e-08,32;UBERON:0001869,2.60e-08,32;UBERON:0003528,7.90e-08,34;UBERON:0002020,7.90e-08,34;UBERON:0001893,7.90e-08,34;UBERON:0010532,4.04e-07,7;UBERON:0000074,4.04e-07,7;UBERON:0001229,4.04e-07,7;UBERON:0001230,4.04e-07,7;UBERON:0003220,4.04e-07,7;UBERON:0005749,4.04e-07,7;UBERON:0004199,4.04e-07,7;UBERON:0004209,4.04e-07,7;UBERON:0004198,4.04e-07,7;UBERON:0002771,4.83e-07,2;UBERON:0001876,7.20e-07,2 | |||
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| ||
|short_description=p@chr8:21939481..21939497,+ | |||
}} | }} |
Latest revision as of 16:48, 31 July 2015
Short description: | p@chr8:21939481..21939497, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:21939481..21939497, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 4.04e-07 | 7 |
kidney corpuscule cell | 4.04e-07 | 7 |
erythroid lineage cell | 7.61e-07 | 2 |
erythroblast | 7.61e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 7.61e-07 | 2 |
erythroid progenitor cell | 7.61e-07 | 2 |
reticulocyte | 7.61e-07 | 2 |
proerythroblast | 7.61e-07 | 2 |
basophilic erythroblast | 7.61e-07 | 2 |
polychromatophilic erythroblast | 7.61e-07 | 2 |
orthochromatic erythroblast | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.40e-26 | 15 |
haemolymphatic fluid | 1.40e-26 | 15 |
organism substance | 1.40e-26 | 15 |
adult organism | 3.71e-17 | 114 |
temporal lobe | 7.03e-15 | 6 |
neocortex | 4.09e-13 | 20 |
postcentral gyrus | 3.45e-12 | 1 |
regional part of cerebral cortex | 5.73e-12 | 22 |
cerebral cortex | 1.41e-10 | 25 |
pallium | 1.41e-10 | 25 |
gyrus | 2.25e-08 | 6 |
regional part of telencephalon | 2.60e-08 | 32 |
cerebral hemisphere | 2.60e-08 | 32 |
brain grey matter | 7.90e-08 | 34 |
gray matter | 7.90e-08 | 34 |
telencephalon | 7.90e-08 | 34 |
primitive nephron | 4.04e-07 | 7 |
renal glomerulus | 4.04e-07 | 7 |
renal corpuscle | 4.04e-07 | 7 |
glomerular capsule | 4.04e-07 | 7 |
metanephric mesenchyme | 4.04e-07 | 7 |
glomerular tuft | 4.04e-07 | 7 |
S-shaped body | 4.04e-07 | 7 |
renal vesicle | 4.04e-07 | 7 |
comma-shaped body | 4.04e-07 | 7 |
middle temporal gyrus | 4.83e-07 | 2 |
amygdala | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.06e-07 | 2 |