FFCP PHASE1:Hg19::chr8:73560820..73560822,+: Difference between revisions
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|id=chr8:73560820..73560822,+
|short_description=p@chr8:73560820..73560822,+
|description=CAGE_peak_at_chr8:73560820..73560822,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:73560820..73560822,+ | |||
|coexpression_cluster_id=C4771 | |||
|description=CAGE_peak_at_chr8:73560820..73560822,+ | |||
|id=chr8:73560820..73560822,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.36e-17;10!UBERON:0003056;5.73e-08;3 | |||
|ontology_enrichment_disease=DOID:5409!1.08e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.24e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002780!7.77e-27!41;UBERON:0001890!7.77e-27!41;UBERON:0006240!7.77e-27!41;UBERON:0003080!4.31e-26!42;UBERON:0000955!8.86e-26!69;UBERON:0006238!8.86e-26!69;UBERON:0002619!1.23e-25!22;UBERON:0005743!3.01e-25!86;UBERON:0001869!3.63e-25!32;UBERON:0003056!4.86e-25!61;UBERON:0001049!7.16e-25!57;UBERON:0005068!7.16e-25!57;UBERON:0006241!7.16e-25!57;UBERON:0007135!7.16e-25!57;UBERON:0001017!9.62e-25!82;UBERON:0001950!3.08e-24!20;UBERON:0000073!3.56e-24!94;UBERON:0001016!3.56e-24!94;UBERON:0002020!1.30e-23!34;UBERON:0003528!1.30e-23!34;UBERON:0001893!1.75e-23!34;UBERON:0000956!2.73e-22!25;UBERON:0000203!2.73e-22!25;UBERON:0002616!1.52e-21!59;UBERON:0002791!1.99e-21!33;UBERON:0003075!2.22e-21!86;UBERON:0007284!2.22e-21!86;UBERON:0002346!3.89e-20!90;UBERON:0000153!2.77e-18!129;UBERON:0007811!2.77e-18!129;UBERON:0000033!7.96e-17!123;UBERON:0000200!1.72e-13!6;UBERON:0004121!2.14e-13!169;UBERON:0000924!6.55e-13!173;UBERON:0006601!6.55e-13!173;UBERON:0007023!9.23e-13!115;UBERON:0002771!1.39e-10!3;UBERON:0001871!3.44e-10!7;UBERON:0000064!3.60e-07!219;UBERON:0002021!5.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001016;4.45e-08;83!UBERON:0002114;5.73e-08;2!UBERON:0001896;7.50e-08;3!UBERON:0005290;7.50e-08;3!UBERON:0000955;5.56e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.34e-10,89;UBERON:0000955,3.87e-10,68;UBERON:0006238,3.87e-10,68;UBERON:0001017,1.57e-08,81;UBERON:0002114,5.54e-08,2;UBERON:0001896,8.29e-08,3;UBERON:0005290,8.29e-08,3;UBERON:0010096,8.29e-08,3 | |||
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|short_description=p@chr8:73560820..73560822,+ | |||
}} | }} |
Latest revision as of 19:49, 31 July 2015
Short description: | p@chr8:73560820..73560822, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:73560820..73560822, + |
Coexpression cluster: | C4771_medulloblastoma_parietal_gastrointestinal_temporal_duodenum_occipital_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.34e-10 | 89 |
brain | 3.87e-10 | 68 |
future brain | 3.87e-10 | 68 |
central nervous system | 1.57e-08 | 81 |
duodenum | 5.54e-08 | 2 |
medulla oblongata | 8.29e-08 | 3 |
myelencephalon | 8.29e-08 | 3 |
future myelencephalon | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.24e-07 | 11 |