FFCP PHASE1:Hg19::chr8:9915231..9915236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:9915231..9915236,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr8:9915231..9915236,+ | |description=CAGE_peak_at_chr8:9915231..9915236,+ | ||
|id=chr8:9915231..9915236,+ | |id=chr8:9915231..9915236,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.07e-28!5;CL:0000540!3.98e-09!6;CL:0000031!3.98e-09!6;CL:0000404!3.98e-09!6;CL:0000039!2.47e-07!7;CL:0000586!2.47e-07!7;CL:0000047!6.11e-07!8 | |ontology_enrichment_celltype=CL:0002322!7.07e-28!5;CL:0000540!3.98e-09!6;CL:0000031!3.98e-09!6;CL:0000404!3.98e-09!6;CL:0000039!2.47e-07!7;CL:0000586!2.47e-07!7;CL:0000047!6.11e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.92e-75;5!CL:0002321;2.50e-25;15!CL:0000540;7.24e-24;6!CL:0000404;7.24e-24;6!CL:0000148;2.99e-14;10!CL:0000147;2.35e-10;14!CL:0000710;2.05e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.92e-75,5;CL:0000540,6.70e-24,6;CL:0000031,6.70e-24,6;CL:0000404,6.70e-24,6;CL:0000047,4.18e-18,8;CL:0000148,3.35e-14,10;CL:0000541,3.35e-14,10;CL:0000147,2.54e-10,14;CL:0000133,8.34e-09,59;CL:0000710,2.17e-07,20;CL:0000221,3.31e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;7.24e-24;6!UBERON:0009117;5.42e-07;10!UBERON:0005564;5.42e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.97e-17!8;UBERON:0003135!4.19e-12!11;UBERON:0003101!3.63e-08!22;UBERON:0000079!3.63e-08!22 | |ontology_enrichment_uberon=UBERON:0000473!9.97e-17!8;UBERON:0003135!4.19e-12!11;UBERON:0003101!3.63e-08!22;UBERON:0000079!3.63e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.67e-09;2!UBERON:0002173;6.67e-09;2!UBERON:0002186;6.67e-09;2!UBERON:0000473;1.59e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.42e-09,2;UBERON:0002173,6.42e-09,2;UBERON:0002186,6.42e-09,2;UBERON:0000473,1.53e-08,8 | |||
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|short_description=p@chr8:9915231..9915236,+ | |short_description=p@chr8:9915231..9915236,+ | ||
}} | }} |
Latest revision as of 20:54, 31 July 2015
Short description: | p@chr8:9915231..9915236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:9915231..9915236, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.92e-75 | 5 |
neuron | 6.70e-24 | 6 |
neuroblast | 6.70e-24 | 6 |
electrically signaling cell | 6.70e-24 | 6 |
neuronal stem cell | 4.18e-18 | 8 |
melanocyte | 3.35e-14 | 10 |
melanoblast | 3.35e-14 | 10 |
pigment cell | 2.54e-10 | 14 |
neurectodermal cell | 8.34e-09 | 59 |
neurecto-epithelial cell | 2.17e-07 | 20 |
ectodermal cell | 3.31e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.42e-09 | 2 |
alveolar duct | 6.42e-09 | 2 |
bronchiole | 6.42e-09 | 2 |
testis | 1.53e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.42e-09 | 2 |