FFCP PHASE1:Hg19::chr9:110249792..110249818,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_AK026253_5end | |association_with_transcript=2bp_to_AK026253_5end | ||
|cluster_id=chr9:110249792..110249818,- | |||
|description=CAGE_peak_2_at_AK026253_5end | |description=CAGE_peak_2_at_AK026253_5end | ||
|id=chr9:110249792..110249818,- | |id=chr9:110249792..110249818,- | ||
|ontology_enrichment_celltype=CL:0000860!2.38e-12!45;CL:0002057!3.29e-12!42;CL:0002009!1.60e-08!65;CL:0000557!2.21e-08!71;CL:0002194!1.72e-07!63;CL:0000576!1.72e-07!63;CL:0000040!1.72e-07!63;CL:0000559!1.72e-07!63;CL:0000839!3.85e-07!70;CL:0000766!4.68e-07!76 | |ontology_enrichment_celltype=CL:0000860!2.38e-12!45;CL:0002057!3.29e-12!42;CL:0002009!1.60e-08!65;CL:0000557!2.21e-08!71;CL:0002194!1.72e-07!63;CL:0000576!1.72e-07!63;CL:0000040!1.72e-07!63;CL:0000559!1.72e-07!63;CL:0000839!3.85e-07!70;CL:0000766!4.68e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.63e-12;6!CL:0002397;1.63e-12;6!CL:0002541;7.09e-12;3!CL:0002577;7.09e-12;3!CL:0000349;4.61e-07;19!CL:0000082;6.99e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.10e-14,9;CL:0002397,3.10e-14,9;CL:0000860,3.94e-14,42;CL:0002057,3.94e-14,42;CL:0000473,3.36e-12,48;CL:0000234,3.36e-12,48;CL:0002541,8.36e-12,3;CL:0002577,8.83e-12,3;CL:0002194,1.71e-09,59;CL:0000576,1.71e-09,59;CL:0000040,1.71e-09,59;CL:0000559,1.71e-09,59;CL:0002009,3.81e-09,61;CL:0000839,2.31e-08,66;CL:0000557,3.20e-08,67;CL:0000766,1.44e-07,72;CL:0000349,5.17e-07,19;CL:0000082,7.69e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;8.36e-11;7!DOID:3904;8.36e-11;7!DOID:1324;1.10e-08;15!DOID:3905;1.63e-08;9!DOID:0050615;3.77e-08;16!DOID:3908;2.76e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.12e-10,7;DOID:3904,1.12e-10,7;DOID:1324,1.25e-08,15;DOID:3905,2.38e-08,9;DOID:0050615,4.23e-08,16;DOID:3908,3.45e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001474!4.48e-07!86;UBERON:0004765!4.80e-07!101;UBERON:0001434!4.80e-07!101;UBERON:0002371!8.63e-07!80;UBERON:0003124!9.61e-07!7 | |ontology_enrichment_uberon=UBERON:0001474!4.48e-07!86;UBERON:0004765!4.80e-07!101;UBERON:0001434!4.80e-07!101;UBERON:0002371!8.63e-07!80;UBERON:0003124!9.61e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.09e-12;3!UBERON:0000920;7.09e-12;3!UBERON:0001987;3.99e-09;4!UBERON:0004802;6.99e-07;19!UBERON:0000115;6.99e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,9.16e-19,7;UBERON:0000920,8.36e-12,3;UBERON:0005631,1.78e-09,14;UBERON:0000158,1.78e-09,14;UBERON:0001987,4.69e-09,4;UBERON:0004340,4.69e-09,4;UBERON:0002371,4.17e-07,76;UBERON:0004802,7.69e-07,19;UBERON:0000115,7.69e-07,19 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0.369754010166788,0,0,0.293600439334847,0.553995408531877,1.60435557976113,1.30206522429511,0,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.863077176966451,1.5369642391746,0.236482229888585,2.06847408441971,0,0,0.752969358170419,0,0,1.53041946185451,0.320929027076094,1.91801137739712,1.31940520074686,0.398927315243264,0,0.290209238628584,0,0,0.75374599577023,0,0.868755378820466,0,0,0.316462387440884,0.633765858935825,1.06302149982522,0,0.673971786878971,0.750884464207532,0.48217676009124,1.14005097496499,0,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0.70296429550139,0.312160076830321,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.621984346622316,0,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.620304078368662,0.647142602455851,0.640365346820666,0.606255142892519,3.32870879020994,1.20956117331872,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0.460404944679482,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0,0.359473404589307,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0.260427761085233,0.174919999992391,0,1.137934482855,1.01701460117107,1.65471377237555,0,0,0,0,0,0,0,0,0,6.42736934762042,0,0.307801034015188,0,0,0,0,1.27600463892768,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.758238955541855,0.150323419414493,0,0.664653872707185,0.330991955875499,1.2557316736289,0,0,0,0,0.391969589657511,0.0870592065804026,0.52418000472609,0,0,0.0730893170861856,0.246346371159628,0.484945082442097,0.0882561266915003,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0.640358984218058,0.19980960958213,0.144090417154106,0,0,0.288109595976299,0.621262677827163,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0,0,0.599037001496973,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0,0.306345576763462,0.655745261419609,0.314108192500469,0,0,0,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0.470531639396343,0,0.28984205722165,0.149254802886874,0.467426619694449,0.554805861502613,0,0,0,0.228840068396924,0.302461847526478,0.310874401165561,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0.128458450192919,0,0,0,0,0,0,0,0.196295437002051,0,0,0.11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| |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0.369754010166788,0,0,0.293600439334847,0.553995408531877,1.60435557976113,1.30206522429511,0,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.863077176966451,1.5369642391746,0.236482229888585,2.06847408441971,0,0,0.752969358170419,0,0,1.53041946185451,0.320929027076094,1.91801137739712,1.31940520074686,0.398927315243264,0,0.290209238628584,0,0,0.75374599577023,0,0.868755378820466,0,0,0.316462387440884,0.633765858935825,1.06302149982522,0,0.673971786878971,0.750884464207532,0.48217676009124,1.14005097496499,0,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0.70296429550139,0.312160076830321,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.621984346622316,0,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.620304078368662,0.647142602455851,0.640365346820666,0.606255142892519,3.32870879020994,1.20956117331872,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0.460404944679482,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0,0.359473404589307,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0.260427761085233,0.174919999992391,0,1.137934482855,1.01701460117107,1.65471377237555,0,0,0,0,0,0,0,0,0,6.42736934762042,0,0.307801034015188,0,0,0,0,1.27600463892768,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.758238955541855,0.150323419414493,0,0.664653872707185,0.330991955875499,1.2557316736289,0,0,0,0,0.391969589657511,0.0870592065804026,0.52418000472609,0,0,0.0730893170861856,0.246346371159628,0.484945082442097,0.0882561266915003,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0.640358984218058,0.19980960958213,0.144090417154106,0,0,0.288109595976299,0.621262677827163,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0,0,0.599037001496973,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.674921674654501,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0,0.306345576763462,0.655745261419609,0.314108192500469,0,0,0,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0.470531639396343,0,0.28984205722165,0.149254802886874,0.467426619694449,0.554805861502613,0,0,0,0.228840068396924,0.302461847526478,0.310874401165561,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0.128458450192919,0,0,0,0,0,0,0,0.196295437002051,0,0,0.11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| ||
|short_description=p2@AK026253 | |short_description=p2@AK026253 | ||
}} | }} |
Latest revision as of 21:30, 31 July 2015
Short description: | p2@AK026253 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK026253_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_AK026253_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.10e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.10e-14 | 9 |
classical monocyte | 3.94e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.94e-14 | 42 |
defensive cell | 3.36e-12 | 48 |
phagocyte | 3.36e-12 | 48 |
chorionic membrane mesenchymal stem cell | 8.36e-12 | 3 |
placental epithelial cell | 8.83e-12 | 3 |
monopoietic cell | 1.71e-09 | 59 |
monocyte | 1.71e-09 | 59 |
monoblast | 1.71e-09 | 59 |
promonocyte | 1.71e-09 | 59 |
macrophage dendritic cell progenitor | 3.81e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.31e-08 | 66 |
granulocyte monocyte progenitor cell | 3.20e-08 | 67 |
myeloid leukocyte | 1.44e-07 | 72 |
extraembryonic cell | 5.17e-07 | 19 |
epithelial cell of lung | 7.69e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 9.16e-19 | 7 |
egg chorion | 8.36e-12 | 3 |
extraembryonic membrane | 1.78e-09 | 14 |
membranous layer | 1.78e-09 | 14 |
placenta | 4.69e-09 | 4 |
allantois | 4.69e-09 | 4 |
bone marrow | 4.17e-07 | 76 |
respiratory tract epithelium | 7.69e-07 | 19 |
lung epithelium | 7.69e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.12e-10 | 7 |
bronchogenic carcinoma | 1.12e-10 | 7 |
lung cancer | 1.25e-08 | 15 |
lung carcinoma | 2.38e-08 | 9 |
respiratory system cancer | 4.23e-08 | 16 |
non-small cell lung carcinoma | 3.45e-07 | 5 |