FFCP PHASE1:Hg19::chr9:132460997..132461006,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:132460997..132461006,+
|short_description=p@chr9:132460997..132461006,+
|description=CAGE_peak_at_chr9:132460997..132461006,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:132460997..132461006,+ | |||
|description=CAGE_peak_at_chr9:132460997..132461006,+ | |||
|id=chr9:132460997..132461006,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-23!180;CL:0000057!5.51e-22!75;CL:0002334!5.18e-18!12;CL:0000048!1.03e-16!430;CL:0000723!4.09e-16!436;CL:0000034!2.41e-15!444;CL:0000136!1.34e-12!15;CL:0002620!7.48e-12!23;CL:0002320!2.51e-11!365;CL:0002570!6.17e-11!8;CL:0002371!1.06e-10!591;CL:0000134!8.47e-10!358;CL:0000144!1.60e-09!625;CL:0000153!6.11e-09!9;CL:0000447!6.11e-09!9;CL:0000680!1.53e-08!57;CL:0000056!1.53e-08!57;CL:0000355!1.53e-08!57;CL:0000219!3.79e-08!390;CL:0000569!9.66e-08!4;CL:0000011!9.66e-08!4;CL:0000187!1.41e-07!54;CL:0000499!1.92e-07!27;CL:0000667!2.40e-07!6;CL:0000058!2.40e-07!6;CL:0000138!2.40e-07!6;CL:0000192!4.19e-07!42;CL:0000514!4.19e-07!42;CL:0000548!5.92e-07!679;CL:0000004!5.92e-07!679;CL:0000255!5.92e-07!679;CL:0000012!8.53e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.35e-38;12!CL:0002582;7.09e-18;3!CL:0002583;4.97e-13;2!CL:0002570;6.18e-12;8!CL:0000136;6.10e-11;13!CL:0000153;3.35e-10;9!CL:0000447;3.35e-10;9!CL:0002580;4.48e-09;3!CL:0000138;5.25e-09;6!CL:0002521;1.04e-08;3!CL:0002579;1.04e-08;3!CL:0002615;1.88e-08;3!CL:0002591;1.64e-07;1!CL:0000569;9.88e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.91e-38,12;CL:0002582,1.01e-17,3;CL:0000136,3.08e-13,15;CL:0002583,4.98e-13,2;CL:0002570,5.69e-12,8;CL:0000048,1.94e-10,427;CL:0000057,2.97e-10,76;CL:0000723,3.31e-10,433;CL:0000153,5.46e-10,9;CL:0000447,5.46e-10,9;CL:0000034,6.61e-10,441;CL:0002580,5.06e-09,3;CL:0002521,7.20e-09,3;CL:0000058,7.87e-09,6;CL:0000138,7.87e-09,6;CL:0000134,8.88e-09,354;CL:0002579,1.02e-08,3;CL:0002320,1.71e-08,361;CL:0002615,3.31e-08,3;CL:0002591,1.55e-07,1;CL:0000219,1.74e-07,386;CL:0000569,7.97e-07,4;CL:0000011,7.97e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;9.88e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.08e-16!14;UBERON:0002199!3.68e-13!45;UBERON:0002416!3.68e-13!45;UBERON:0002384!5.95e-11!375;UBERON:0003688!6.75e-11!6;UBERON:0002358!6.75e-11!6;UBERON:0003684!6.75e-11!6;UBERON:0001178!6.75e-11!6;UBERON:0000914!8.27e-11!83;UBERON:0002329!8.27e-11!83;UBERON:0003077!8.27e-11!83;UBERON:0003059!8.27e-11!83;UBERON:0007282!8.27e-11!83;UBERON:0009618!8.27e-11!83;UBERON:0007285!8.27e-11!83;UBERON:0004290!3.66e-10!70;UBERON:0002072!1.07e-09!5;UBERON:0000486!2.41e-09!82;UBERON:0003102!2.65e-09!95;UBERON:0004457!1.27e-08!12;UBERON:0000042!1.27e-08!12;UBERON:0002097!2.90e-08!40;UBERON:0001134!1.31e-07!61;UBERON:0002036!1.31e-07!61;UBERON:0003082!1.31e-07!61;UBERON:0002385!3.41e-07!63;UBERON:0001015!3.41e-07!63;UBERON:0000383!3.41e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;3.74e-19;5!UBERON:0004457;1.10e-15;9!UBERON:0000042;1.10e-15;9!UBERON:0003688;1.78e-15;6!UBERON:0002358;1.78e-15;6!UBERON:0003684;1.78e-15;6!UBERON:0001178;1.78e-15;6!UBERON:0001013;1.61e-14;14!UBERON:0002190;1.04e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,2.42e-19,5;UBERON:0003688,3.08e-15,6;UBERON:0002358,3.08e-15,6;UBERON:0003684,3.08e-15,6;UBERON:0001178,3.08e-15,6;UBERON:0001013,1.20e-14,14;UBERON:0004457,1.62e-11,12;UBERON:0000042,1.62e-11,12;UBERON:0002190,7.20e-09,3;UBERON:0002384,4.20e-08,371 | |||
|phase1_expression=2.90685406832891,0.856402095563933,1.26858963686374,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,1.89515962028049,0.261185628199839,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.434539556882471,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,1.5608003841516,0.570471821544449,0.896692083310806,0.117434498643765,0,0,0.408308342509787,0,0.516628905878827,0,0,0,1.43723628363248,0,0.250237039743928,0.831192346452549,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0.515262646192195,0,0.37223371266318,0.337552664482532,1.65642908774038,0,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,7.15312891703765,0,0,0,0,0,0,0,0,3.29296134712308,0.977208552881205,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.48107807818777,0.920771839728375,3.36792113319688,0.896974044789907,1.53512174720011,2.57366273829772,0,2.62156479464514,2.48586415438378,1.56041596426237,2.07701771673448,1.39452454151951,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,1.73986598415015,0.18532421910392,0,0,0,0,0.255897791311334,0,1.90921948755562,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,3.39024349860728,0,0.66343897524122,1.75380354101505,1.15755106853338,0,0,0,0,0.143411352204052,0.294747123039363,0,0.709522128141196,1.26664581178598,0.658589785919804,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68658645196373,1.63599316893057,0.554805861502613,0,1.0062716070103,0.889811221596536,2.51724075236616,0.756154618816195,1.86524640699337,0.443565449968902,0,0,0.310525913752519,0,0.265841714557995,0,0.901545653983311,0,0,0,0.107410557042488,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0.665756774185513,0,0 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|phase1_expression=2.90685406832891,0.856402095563933,1.26858963686374,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,1.89515962028049,0.261185628199839,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.434539556882471,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,1.5608003841516,0.570471821544449,0.896692083310806,0.117434498643765,0,0,0.408308342509787,0,0.516628905878827,0,0,0,1.43723628363248,0,0.250237039743928,0.831192346452549,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0.515262646192195,0,0.37223371266318,0.337552664482532,1.65642908774038,0,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,7.15312891703765,0,0,0,0,0,0,0,0,3.29296134712308,0.977208552881205,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.48107807818777,0.920771839728375,3.36792113319688,0.896974044789907,1.53512174720011,2.57366273829772,0,2.62156479464514,2.48586415438378,1.56041596426237,2.07701771673448,1.39452454151951,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0,1.73986598415015,0.18532421910392,0,0,0,0,0.255897791311334,0,1.90921948755562,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,3.39024349860728,0,0.66343897524122,1.75380354101505,1.15755106853338,0,0,0,0,0.143411352204052,0.294747123039363,0,0.709522128141196,1.26664581178598,0.658589785919804,0.75894634753143,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68658645196373,1.63599316893057,0.554805861502613,0,1.0062716070103,0.889811221596536,2.51724075236616,0.756154618816195,1.86524640699337,0.443565449968902,0,0,0.310525913752519,0,0.265841714557995,0,0.901545653983311,0,0,0,0.107410557042488,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr9:132460997..132461006,+ | |||
}} | }} |
Latest revision as of 23:27, 31 July 2015
Short description: | p@chr9:132460997..132461006, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132460997..132461006, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.91e-38 | 12 |
visceral preadipocyte | 1.01e-17 | 3 |
fat cell | 3.08e-13 | 15 |
subcutaneous preadipocyte | 4.98e-13 | 2 |
mesenchymal stem cell of adipose | 5.69e-12 | 8 |
multi fate stem cell | 1.94e-10 | 427 |
fibroblast | 2.97e-10 | 76 |
somatic stem cell | 3.31e-10 | 433 |
GAG secreting cell | 5.46e-10 | 9 |
carbohydrate secreting cell | 5.46e-10 | 9 |
stem cell | 6.61e-10 | 441 |
preadipocyte of the breast | 5.06e-09 | 3 |
subcutaneous fat cell | 7.20e-09 | 3 |
chondroblast | 7.87e-09 | 6 |
chondrocyte | 7.87e-09 | 6 |
mesenchymal cell | 8.88e-09 | 354 |
omentum preadipocyte | 1.02e-08 | 3 |
connective tissue cell | 1.71e-08 | 361 |
adipocyte of omentum tissue | 3.31e-08 | 3 |
smooth muscle cell of the pulmonary artery | 1.55e-07 | 1 |
motile cell | 1.74e-07 | 386 |
cardiac mesenchymal cell | 7.97e-07 | 4 |
migratory trunk neural crest cell | 7.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 2.42e-19 | 5 |
omentum | 3.08e-15 | 6 |
peritoneum | 3.08e-15 | 6 |
abdominal cavity | 3.08e-15 | 6 |
visceral peritoneum | 3.08e-15 | 6 |
adipose tissue | 1.20e-14 | 14 |
cavity lining | 1.62e-11 | 12 |
serous membrane | 1.62e-11 | 12 |
subcutaneous adipose tissue | 7.20e-09 | 3 |
connective tissue | 4.20e-08 | 371 |