FFCP PHASE1:Hg19::chr9:139442039..139442067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc004cib.1_5end | |association_with_transcript=-11bp_to_uc004cib.1_5end | ||
|cluster_id=chr9:139442039..139442067,+ | |||
|coexpression_cluster_id=C727 | |coexpression_cluster_id=C727 | ||
|description=CAGE_peak_1_at_uc004cib.1_5end | |description=CAGE_peak_1_at_uc004cib.1_5end | ||
|id=chr9:139442039..139442067,+ | |id=chr9:139442039..139442067,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.32e-12;1!UBERON:0000358;2.08e-12;1!UBERON:0006242;2.08e-12;1!UBERON:0005754;3.85e-12;1!UBERON:0006595;7.24e-07;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.12e-11!129;UBERON:0004185!8.12e-11!129;UBERON:0003101!1.94e-10!22;UBERON:0000079!1.94e-10!22;UBERON:0001007!3.08e-10!155;UBERON:0001555!3.08e-10!155;UBERON:0007026!3.08e-10!155;UBERON:0007023!5.55e-10!115;UBERON:0000059!1.24e-09!11;UBERON:0004119!1.63e-09!169;UBERON:0000925!1.63e-09!169;UBERON:0006595!1.63e-09!169;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0005409!4.31e-09!35;UBERON:0001046!1.56e-08!19;UBERON:0001155!1.90e-08!9;UBERON:0003135!2.56e-08!11;UBERON:0005904!3.60e-07!4;UBERON:0000160!3.72e-07!27;UBERON:0005156!6.06e-07!59;UBERON:0000990!6.06e-07!59;UBERON:0000162!8.32e-07!14;UBERON:0001353!8.32e-07!14;UBERON:0000163!8.32e-07!14;UBERON:0006866!8.32e-07!14;UBERON:0000164!8.32e-07!14;UBERON:0000931!8.32e-07!14 | |ontology_enrichment_uberon=UBERON:0004921!8.12e-11!129;UBERON:0004185!8.12e-11!129;UBERON:0003101!1.94e-10!22;UBERON:0000079!1.94e-10!22;UBERON:0001007!3.08e-10!155;UBERON:0001555!3.08e-10!155;UBERON:0007026!3.08e-10!155;UBERON:0007023!5.55e-10!115;UBERON:0000059!1.24e-09!11;UBERON:0004119!1.63e-09!169;UBERON:0000925!1.63e-09!169;UBERON:0006595!1.63e-09!169;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0005409!4.31e-09!35;UBERON:0001046!1.56e-08!19;UBERON:0001155!1.90e-08!9;UBERON:0003135!2.56e-08!11;UBERON:0005904!3.60e-07!4;UBERON:0000160!3.72e-07!27;UBERON:0005156!6.06e-07!59;UBERON:0000990!6.06e-07!59;UBERON:0000162!8.32e-07!14;UBERON:0001353!8.32e-07!14;UBERON:0000163!8.32e-07!14;UBERON:0006866!8.32e-07!14;UBERON:0000164!8.32e-07!14;UBERON:0000931!8.32e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.73e-17;22!UBERON:0000059;1.05e-16;11!UBERON:0006947;1.59e-15;3!UBERON:0004054;1.59e-15;3!UBERON:0000160;1.72e-15;17!UBERON:0004921;2.34e-15;33!UBERON:0001000;2.08e-12;1!UBERON:0005352;2.08e-12;1!UBERON:0000998;3.85e-12;1!UBERON:0000996;3.85e-12;1!UBERON:0006868;3.85e-12;1!UBERON:0001155;5.32e-12;9!UBERON:0005904;6.92e-12;4!UBERON:0001555;4.13e-07;54!UBERON:0001255;6.24e-07;2!UBERON:0001556;6.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.01e-16,11;UBERON:0000160,1.61e-15,17;UBERON:0006947,1.91e-15,3;UBERON:0004054,1.91e-15,3;UBERON:0005409,4.55e-15,25;UBERON:0001000,2.20e-12,1;UBERON:0005352,2.20e-12,1;UBERON:0000996,4.31e-12,1;UBERON:0000998,4.81e-12,1;UBERON:0006868,4.81e-12,1;UBERON:0001155,5.23e-12,9;UBERON:0005904,7.95e-12,4;UBERON:0007023,2.93e-10,114;UBERON:0001046,1.49e-09,19;UBERON:0004921,5.37e-08,118;UBERON:0001007,1.13e-07,145;UBERON:0001555,1.13e-07,145;UBERON:0007026,1.13e-07,145;UBERON:0000162,1.14e-07,14;UBERON:0001353,1.14e-07,14;UBERON:0000163,1.14e-07,14;UBERON:0006866,1.14e-07,14;UBERON:0000164,1.14e-07,14;UBERON:0000931,1.14e-07,14;UBERON:0004122,3.43e-07,15;UBERON:0001255,6.07e-07,2;UBERON:0001556,6.07e-07,2;UBERON:0004119,8.22e-07,160;UBERON:0000925,8.22e-07,160;UBERON:0006595,8.22e-07,160 | |||
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| ||
|short_description=p1@uc004cib.1 | |short_description=p1@uc004cib.1 | ||
}} | }} |
Latest revision as of 00:20, 1 August 2015
Short description: | p1@uc004cib.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc004cib.1_5end |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | -11bp_to_uc004cib.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 1.01e-16 | 11 |
intestine | 1.61e-15 | 17 |
male genital duct | 1.91e-15 | 3 |
internal male genitalia | 1.91e-15 | 3 |
gastrointestinal system | 4.55e-15 | 25 |
vas deferens | 2.20e-12 | 1 |
spermatic cord | 2.20e-12 | 1 |
vagina | 4.31e-12 | 1 |
seminal vesicle | 4.81e-12 | 1 |
seminal fluid secreting gland | 4.81e-12 | 1 |
colon | 5.23e-12 | 9 |
duct of male reproductive system | 7.95e-12 | 4 |
adult organism | 2.93e-10 | 114 |
hindgut | 1.49e-09 | 19 |
subdivision of digestive tract | 5.37e-08 | 118 |
digestive system | 1.13e-07 | 145 |
digestive tract | 1.13e-07 | 145 |
primitive gut | 1.13e-07 | 145 |
cloaca | 1.14e-07 | 14 |
anal region | 1.14e-07 | 14 |
embryonic cloaca | 1.14e-07 | 14 |
terminal part of digestive tract | 1.14e-07 | 14 |
primitive urogenital sinus | 1.14e-07 | 14 |
proctodeum | 1.14e-07 | 14 |
genitourinary system | 3.43e-07 | 15 |
urinary bladder | 6.07e-07 | 2 |
lower urinary tract | 6.07e-07 | 2 |
endoderm-derived structure | 8.22e-07 | 160 |
endoderm | 8.22e-07 | 160 |
presumptive endoderm | 8.22e-07 | 160 |