FFCP PHASE1:Hg19::chr9:3742840..3742869,+: Difference between revisions
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|id=chr9:3742840..3742869,+
|short_description=p@chr9:3742840..3742869,+
|description=CAGE_peak_at_chr9:3742840..3742869,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:3742840..3742869,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr9:3742840..3742869,+ | |||
|id=chr9:3742840..3742869,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.05e-07!6;CL:0000031!7.05e-07!6;CL:0000404!7.05e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.19e-12;6!CL:0002149;2.74e-12;6!CL:0002255;2.74e-12;6!CL:0000499;1.47e-10;28!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0002149,2.74e-12,6;CL:0002255,2.74e-12,6;CL:0000499,1.47e-10,28;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease=DOID:201!9.49e-14!6;DOID:0060100!9.49e-14!6;DOID:3371!1.65e-10!1;DOID:4549!1.65e-10!1;DOID:5861!1.65e-10!1;DOID:6496!1.65e-10!1;DOID:0060085!5.79e-10!1;DOID:3165!5.79e-10!1;DOID:0060121!5.79e-10!1;DOID:2438!5.79e-10!1;DOID:4418!5.79e-10!1;DOID:5662!6.91e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6!DOID:3001;2.74e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6;DOID:3001,2.74e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3 | |||
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|short_description=p@chr9:3742840..3742869,+ | |||
}} | }} |
Latest revision as of 02:00, 1 August 2015
Short description: | p@chr9:3742840..3742869, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:3742840..3742869, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
epithelial cell of uterus | 2.74e-12 | 6 |
stromal cell of endometrium | 2.74e-12 | 6 |
stromal cell | 1.47e-10 | 28 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |
female reproductive endometrioid cancer | 2.74e-12 | 6 |