FFCP PHASE1:Hg19::chr9:88356530..88356542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:88356530..88356542,+ | |||
|coexpression_cluster_id=C448 | |||
|description=CAGE_peak_at_chr9:88356530..88356542,+ | |description=CAGE_peak_at_chr9:88356530..88356542,+ | ||
|id=chr9:88356530..88356542,+ | |id=chr9:88356530..88356542,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.02e-42!140;CL:0000037!2.23e-32!172;CL:0000566!2.23e-32!172;CL:0000988!1.11e-29!182;CL:0002031!1.48e-29!124;CL:0002087!6.90e-28!119;CL:0002032!2.77e-26!165;CL:0000837!2.77e-26!165;CL:0000766!1.71e-20!76;CL:0002057!4.63e-19!42;CL:0000860!2.26e-17!45;CL:0000557!5.20e-16!71;CL:0002393!2.21e-15!9;CL:0002397!2.21e-15!9;CL:0000838!9.47e-14!52;CL:0002009!1.13e-13!65;CL:0000839!1.62e-13!70;CL:0000542!2.22e-13!53;CL:0000051!2.22e-13!53;CL:0000763!3.36e-13!112;CL:0000049!3.36e-13!112;CL:0000791!1.06e-12!18;CL:0000789!1.06e-12!18;CL:0002420!1.06e-12!18;CL:0002419!1.06e-12!18;CL:0000790!1.06e-12!18;CL:0002194!1.42e-11!63;CL:0000576!1.42e-11!63;CL:0000040!1.42e-11!63;CL:0000559!1.42e-11!63;CL:0000094!1.96e-10!8;CL:0000624!2.28e-09!6;CL:0000134!5.44e-09!358;CL:0002320!1.58e-08!365;CL:0000084!2.00e-08!25;CL:0000827!2.00e-08!25;CL:0000623!3.67e-08!3;CL:0000825!3.67e-08!3;CL:0000219!2.30e-07!390;CL:0000081!2.48e-07!11;CL:0000784!4.59e-07!3;CL:0000842!4.79e-07!3 | |ontology_enrichment_celltype=CL:0000738!6.02e-42!140;CL:0000037!2.23e-32!172;CL:0000566!2.23e-32!172;CL:0000988!1.11e-29!182;CL:0002031!1.48e-29!124;CL:0002087!6.90e-28!119;CL:0002032!2.77e-26!165;CL:0000837!2.77e-26!165;CL:0000766!1.71e-20!76;CL:0002057!4.63e-19!42;CL:0000860!2.26e-17!45;CL:0000557!5.20e-16!71;CL:0002393!2.21e-15!9;CL:0002397!2.21e-15!9;CL:0000838!9.47e-14!52;CL:0002009!1.13e-13!65;CL:0000839!1.62e-13!70;CL:0000542!2.22e-13!53;CL:0000051!2.22e-13!53;CL:0000763!3.36e-13!112;CL:0000049!3.36e-13!112;CL:0000791!1.06e-12!18;CL:0000789!1.06e-12!18;CL:0002420!1.06e-12!18;CL:0002419!1.06e-12!18;CL:0000790!1.06e-12!18;CL:0002194!1.42e-11!63;CL:0000576!1.42e-11!63;CL:0000040!1.42e-11!63;CL:0000559!1.42e-11!63;CL:0000094!1.96e-10!8;CL:0000624!2.28e-09!6;CL:0000134!5.44e-09!358;CL:0002320!1.58e-08!365;CL:0000084!2.00e-08!25;CL:0000827!2.00e-08!25;CL:0000623!3.67e-08!3;CL:0000825!3.67e-08!3;CL:0000219!2.30e-07!390;CL:0000081!2.48e-07!11;CL:0000784!4.59e-07!3;CL:0000842!4.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;8.46e-17;3!CL:0000094;8.86e-17;8!CL:0002393;9.06e-15;6!CL:0002397;9.06e-15;6!CL:0000771;1.78e-12;2!CL:0000081;3.85e-12;11!CL:0000791;5.32e-10;18!CL:0000789;5.32e-10;18!CL:0002419;5.32e-10;18!CL:0000542;1.36e-08;53!CL:0000624;2.20e-08;6!CL:0000775;5.73e-08;3!CL:0000084;4.88e-07;25!CL:0000236;5.67e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.54e-27,136;CL:0000037,1.16e-20,168;CL:0000988,2.61e-19,177;CL:0002032,2.11e-18,161;CL:0000837,2.11e-18,161;CL:0000623,4.69e-17,3;CL:0000825,4.69e-17,3;CL:0000094,8.74e-17,8;CL:0002031,1.47e-16,120;CL:0000838,8.73e-15,52;CL:0000542,1.86e-14,53;CL:0000051,1.86e-14,53;CL:0002087,5.29e-14,115;CL:0000771,1.83e-12,2;CL:0000081,3.81e-12,11;CL:0000791,4.95e-10,18;CL:0000789,4.95e-10,18;CL:0002420,4.95e-10,18;CL:0002419,4.95e-10,18;CL:0000790,4.95e-10,18;CL:0002393,7.01e-10,9;CL:0002397,7.01e-10,9;CL:0000766,1.19e-09,72;CL:0000624,2.57e-08,6;CL:0000775,6.26e-08,3;CL:0000134,2.27e-07,354;CL:0002320,4.16e-07,361;CL:0000084,4.64e-07,25;CL:0000827,4.64e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;5.32e-10;18!CL:0000051;1.36e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.52e-14!80;UBERON:0002390!9.11e-14!102;UBERON:0003061!9.11e-14!102;UBERON:0001474!5.35e-13!86;UBERON:0002193!8.98e-12!112;UBERON:0004765!5.71e-10!101;UBERON:0001434!5.71e-10!101;UBERON:0002405!1.11e-08!115;UBERON:0002384!6.65e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!1.52e-14!80;UBERON:0002390!9.11e-14!102;UBERON:0003061!9.11e-14!102;UBERON:0001474!5.35e-13!86;UBERON:0002193!8.98e-12!112;UBERON:0004765!5.71e-10!101;UBERON:0001434!5.71e-10!101;UBERON:0002405!1.11e-08!115;UBERON:0002384!6.65e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.47e-07,371 | |||
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| ||
|short_description=p@chr9:88356530..88356542,+ | |short_description=p@chr9:88356530..88356542,+ | ||
}} | }} |
Latest revision as of 03:07, 1 August 2015
Short description: | p@chr9:88356530..88356542, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:88356530..88356542, + |
Coexpression cluster: | C448_Eosinophils_CD19_Neutrophils_immature_CD14_CD34_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.54e-27 | 136 |
hematopoietic stem cell | 1.16e-20 | 168 |
hematopoietic cell | 2.61e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.11e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-18 | 161 |
natural killer cell | 4.69e-17 | 3 |
pro-NK cell | 4.69e-17 | 3 |
granulocyte | 8.74e-17 | 8 |
hematopoietic lineage restricted progenitor cell | 1.47e-16 | 120 |
lymphoid lineage restricted progenitor cell | 8.73e-15 | 52 |
lymphocyte | 1.86e-14 | 53 |
common lymphoid progenitor | 1.86e-14 | 53 |
nongranular leukocyte | 5.29e-14 | 115 |
eosinophil | 1.83e-12 | 2 |
blood cell | 3.81e-12 | 11 |
mature alpha-beta T cell | 4.95e-10 | 18 |
alpha-beta T cell | 4.95e-10 | 18 |
immature T cell | 4.95e-10 | 18 |
mature T cell | 4.95e-10 | 18 |
immature alpha-beta T cell | 4.95e-10 | 18 |
intermediate monocyte | 7.01e-10 | 9 |
CD14-positive, CD16-positive monocyte | 7.01e-10 | 9 |
myeloid leukocyte | 1.19e-09 | 72 |
CD4-positive, alpha-beta T cell | 2.57e-08 | 6 |
neutrophil | 6.26e-08 | 3 |
mesenchymal cell | 2.27e-07 | 354 |
connective tissue cell | 4.16e-07 | 361 |
T cell | 4.64e-07 | 25 |
pro-T cell | 4.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.47e-07 | 371 |