FFCP PHASE1:Hg19::chr9:97253706..97253709,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:97253706..97253709,- | |||
|description=CAGE_peak_at_chr9:97253706..97253709,- | |description=CAGE_peak_at_chr9:97253706..97253709,- | ||
|id=chr9:97253706..97253709,- | |id=chr9:97253706..97253709,- | ||
|ontology_enrichment_celltype=CL:0000066!8.96e-09!254 | |ontology_enrichment_celltype=CL:0000066!8.96e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.17e-12;5!CL:0000511;6.40e-08;1!CL:0002625;6.40e-08;1!CL:0000216;6.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.05e-08,1;CL:0002625,5.05e-08,1;CL:0000216,5.05e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.61e-08;1!UBERON:0006242;6.40e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.75e-38!143;DOID:162!7.31e-34!235;DOID:14566!2.73e-33!239;DOID:305!1.44e-30!106;DOID:1749!1.47e-13!14;DOID:0050686!4.41e-10!137;DOID:299!6.23e-08!25 | |ontology_enrichment_disease=DOID:0050687!3.75e-38!143;DOID:162!7.31e-34!235;DOID:14566!2.73e-33!239;DOID:305!1.44e-30!106;DOID:1749!1.47e-13!14;DOID:0050686!4.41e-10!137;DOID:299!6.23e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:169;1.23e-10;6!DOID:1325;5.00e-09;7!DOID:3904;5.00e-09;7!DOID:1749;7.38e-08;14!DOID:5409;1.64e-07;4!DOID:3905;4.02e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.39e-10,6;DOID:1325,3.53e-09,7;DOID:3904,3.53e-09,7;DOID:1749,6.93e-08,14;DOID:0050687,1.15e-07,143;DOID:5409,1.18e-07,4;DOID:3905,3.08e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000002!3.95e-07!6;UBERON:0001560!3.95e-07!6;UBERON:0009497!4.89e-07!25;UBERON:0000015!4.89e-07!25;UBERON:0002423!4.89e-07!25;UBERON:0006235!4.89e-07!25;UBERON:0004161!4.89e-07!25;UBERON:0005409!7.20e-07!35 | |ontology_enrichment_uberon=UBERON:0000002!3.95e-07!6;UBERON:0001560!3.95e-07!6;UBERON:0009497!4.89e-07!25;UBERON:0000015!4.89e-07!25;UBERON:0002423!4.89e-07!25;UBERON:0006235!4.89e-07!25;UBERON:0004161!4.89e-07!25;UBERON:0005409!7.20e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.17e-12;5!UBERON:0002410;1.17e-12;5!UBERON:0001136;6.40e-08;1!UBERON:0001343;6.40e-08;1!UBERON:0004910;6.40e-08;1!UBERON:0004813;6.40e-08;1!UBERON:0000010;3.04e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.35e-12,5;UBERON:0002410,1.35e-12,5;UBERON:0001136,5.05e-08,1;UBERON:0001343,5.05e-08,1;UBERON:0004910,5.05e-08,1;UBERON:0005154,5.05e-08,1;UBERON:0005295,5.05e-08,1;UBERON:0004813,5.05e-08,1;UBERON:0005297,5.05e-08,1;UBERON:0005294,5.05e-08,1;UBERON:0010141,5.05e-08,1;UBERON:0005891,5.05e-08,1;UBERON:0000010,3.28e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,3.80265104465493,1.96565443335525,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.0915694648183434,0.577566499444116,0,0,1.6068392984416,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,1.92283328029452,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,2.43282702530686,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0.16480387422676,11.4007720389116,0,0.276283915531148,0.251932747854276,0,0,0,0,0.716084698702437,0,0,0,0,0,0,0,4.16684417736373,0.437299999980979,0,0.455173793141999,1.5255219017566,0,0.689486746482929,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0.21787692703798,1.25481369850743,0.0769502585037971,0,0.23056390438806,0,0.869178975376065,0,0,0,0,0,0,0.225595660617181,0,0,0.948768663620925,0.476809736941136,0.210998064528027,0.652931232636591,0,0.649165919226273,1.99052386215701,0.884575645033392,0,1.18608451472249,0.247127877893006,0.208843899010911,0,0,0,0.547364367646998,0.391329237864179,0.242780379534093,0.789168805698781,0,0.30607276163049,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0.277349346026277,0.347119476670262,0.195984794828755,0.69647365264322,0,0.171986032471617,0,0.511625219603299,0.246346371159628,0,0,0,0.137041924646751,0.19871461170299,0,0.977756913674015,0,1.06726497369676,3.19695375331408,0,0.114536596165916,0.686379991447858,0,0.372757606696298,0.235694034616795,0.271808412147228,0.418411385249333,0,0.577901179803038,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.393915911536118,0.164831716762333,0.471824806979294,0.492137407573744,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,0.472834243795189,0,0.633602019116439,0.179287339332845,0.959575986597226,0,0,0,0,0,0,0,0.328370082997356,0,0,0.58620893471233,0,0,0.13223260174269,0.513260513652988,0,0,0,0,0,2.76656284657122,1.21792598380896,1.27668251554036,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0.151649117541648,0.570930667089935,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0.231522474323834,2.44736704506468,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,1.40683808434017,1.1860729253635,0,2.73024095480035,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,1.76665893301846,0.589848616738702,0.183428598521679,0,0,0,0.198916222116275,0.0752103283492573,0.80682027481408,0,0.785720083444267,0,0.739280431085226,0,0,0,0.0634158101939068,0,0,0,0,0.894336993477167,1.07140367175657,0,0,0.227662191351298,0.0887023701626388,0.230467975111559,0.171488009437418,0,0,0.590969204419841,0.444925607568277,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,1.51113852978563,0.521574816907738,0.801711364730253,0,0,0,0.860454717640555,0.118332000730565,0,0.423387050190929,0,0,0,0.671132590786754,0.196300467230486,0.365753774946808,0,0,0,0,1.16969731731053,2.38740930193642,0,1.6941912305844,0,1.66059127923341,0.771741581079447,0.218559560503957,0,0,0.707029641304878,0,0,0,0,0,0,0,0.535661815816973,0.705789743431384,0.0802413666891683,0.730336388246517,0,0,0.631086248772738,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0.506794004045748,0,0,0,0.50141507858475,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.808426818959282,2.34640942403454,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr9:97253706..97253709,- | |short_description=p@chr9:97253706..97253709,- | ||
}} | }} |
Latest revision as of 03:41, 1 August 2015
Short description: | p@chr9:97253706..97253709, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:97253706..97253709, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.05e-08 | 1 |
seminiferous tubule epithelial cell | 5.05e-08 | 1 |
Sertoli cell | 5.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.35e-12 | 5 |
autonomic nervous system | 1.35e-12 | 5 |
mesothelium | 5.05e-08 | 1 |
seminiferous tubule of testis | 5.05e-08 | 1 |
epithelium of male gonad | 5.05e-08 | 1 |
epithelial cord | 5.05e-08 | 1 |
sex cord | 5.05e-08 | 1 |
seminiferous tubule epithelium | 5.05e-08 | 1 |
testis sex cord | 5.05e-08 | 1 |
genital ridge | 5.05e-08 | 1 |
primitive sex cord of indifferent gonad | 5.05e-08 | 1 |
coelomic epithelium | 5.05e-08 | 1 |
peripheral nervous system | 3.28e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.39e-10 | 6 |
bronchus cancer | 3.53e-09 | 7 |
bronchogenic carcinoma | 3.53e-09 | 7 |
squamous cell carcinoma | 6.93e-08 | 14 |
cell type cancer | 1.15e-07 | 143 |
lung small cell carcinoma | 1.18e-07 | 4 |
lung carcinoma | 3.08e-07 | 9 |