FFCP PHASE1:Hg19::chr9:98271722..98271738,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:98271722..98271738,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_at_chr9:98271722..98271738,+ | |description=CAGE_peak_at_chr9:98271722..98271738,+ | ||
|id=chr9:98271722..98271738,+ | |id=chr9:98271722..98271738,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.74e-10!52;CL:0000542!4.09e-10!53;CL:0000051!4.09e-10!53;CL:0000084!2.06e-07!25;CL:0000827!2.06e-07!25;CL:0000540!2.65e-07!6;CL:0000031!2.65e-07!6;CL:0000404!2.65e-07!6;CL:0000791!3.08e-07!18;CL:0000789!3.08e-07!18;CL:0002420!3.08e-07!18;CL:0002419!3.08e-07!18;CL:0000790!3.08e-07!18 | |ontology_enrichment_celltype=CL:0000838!1.74e-10!52;CL:0000542!4.09e-10!53;CL:0000051!4.09e-10!53;CL:0000084!2.06e-07!25;CL:0000827!2.06e-07!25;CL:0000540!2.65e-07!6;CL:0000031!2.65e-07!6;CL:0000404!2.65e-07!6;CL:0000791!3.08e-07!18;CL:0000789!3.08e-07!18;CL:0002420!3.08e-07!18;CL:0002419!3.08e-07!18;CL:0000790!3.08e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.29e-25;3!CL:0000084;8.39e-20;25!CL:0000791;4.84e-16;18!CL:0000789;4.84e-16;18!CL:0002419;4.84e-16;18!CL:0000624;9.34e-13;6!CL:0000542;3.93e-09;53!CL:0000625;2.05e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.58e-25,3;CL:0000825,2.58e-25,3;CL:0000084,7.79e-20,25;CL:0000827,7.79e-20,25;CL:0000838,3.73e-17,52;CL:0000542,8.51e-17,53;CL:0000051,8.51e-17,53;CL:0000791,4.78e-16,18;CL:0000789,4.78e-16,18;CL:0002420,4.78e-16,18;CL:0002419,4.78e-16,18;CL:0000790,4.78e-16,18;CL:0000624,9.16e-13,6;CL:0000625,2.05e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.84e-16;18!CL:0000051;3.93e-09;53 | |||
|ontology_enrichment_disease=DOID:162!4.00e-14!235;DOID:14566!9.96e-14!239;DOID:0050687!1.34e-12!143;DOID:3095!4.19e-09!22;DOID:2994!4.19e-09!22;DOID:171!2.96e-08!10;DOID:305!9.27e-08!106;DOID:169!5.73e-07!6 | |ontology_enrichment_disease=DOID:162!4.00e-14!235;DOID:14566!9.96e-14!239;DOID:0050687!1.34e-12!143;DOID:3095!4.19e-09!22;DOID:2994!4.19e-09!22;DOID:171!2.96e-08!10;DOID:305!9.27e-08!106;DOID:169!5.73e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:4362;3.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.74e-07!94;UBERON:0001016!4.74e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!4.74e-07!94;UBERON:0001016!4.74e-07!94 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,0,1.15148819429164,0.77408061658038,0,0,0,0.154934401160603,0.568676929949686,0.293600439334847,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,4.13090517239049,3.14408610199332,1.64481199199607,0,0.32592226663359,0.946895611469467,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0.741432815810302,0.267540828089713,0,0,0.766440987203842,2.06176467289578,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,4.23374160771938,5.61624411145365,7.09639579025715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,3.94061520403854,3.88129634747131,3.85029108839245,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0.318852545457645,0,0,0.423347165447766,0.324621940274555,0,0.456469358066384,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0.111308705022906,2.47205811340139,3.1668811219199,0,0,1.76352923497993,0,0.369254416383208,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.874813840149763,0.520874984799877,0,0.120596438625408,0,0.442317039724898,0.295547618953547,0.219385397153973,0.21787692703798,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0,1.20258735531594,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0,0.69647365264322,0,0.171986032471617,0,0,0.164230914106418,0,0.441280633457501,0,0,0.19871461170299,0.0633107959558787,0.782205530939212,0.0801588202515337,0,0,0.144090417154106,0.343609788497747,2.23073497220554,0.14405479798815,0.124252535565433,0,0,0,0.509991088181609,0.288950589901519,0,0,0,0,1.57732412567589,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0,0.492137407573744,0,0,0.136203406111576,0.643012593860077,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0.383830394638891,0,0,1.27134268827375,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0.197611631897944,0.852548188666271,0,0,0,0,0,0.942324577501406,0,0,0.1251909307065,0,0,0.0620964029413835,0.415045904808692,0.249960815924213,0.606596470166591,0.285465333544967,0,0,2.60857851499485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0.639471856518258,0.862598491173454,0.471797825567689,0.764467467344097,0,0.637724760305049,1.23935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0.943757786781923,0.183428598521679,0.231051332300676,0,0,0.596748666348824,0,0,0,0,0.163771917510097,0.443568258651136,0.135075169236789,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0.227662191351298,0,0.921871900446234,0.342976018874837,0,0.0657727735628491,0.236387681767936,0,0,0,0.280272163313789,0,0,0,0.142953088353313,1.42212250559454,0.23248285073625,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,1.63757624423474,4.3769170535501,0.356760272332706,1.24240690242856,0.329821550236287,0.754814217833368,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.299823467774787,0,0.352894871715692,0.0802413666891683,0,0,0,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0.378499274505237,0.437062287854782,2.4072715192173,0.305966489225945,0,0.275684698604535,0.250707539292375,0.227336094654718,0.803892390468535,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0.407016343054873,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.152826811495903,0.164201178899891,0.157421562627358,0,1.15148819429164,0.77408061658038,0,0,0,0.154934401160603,0.568676929949686,0.293600439334847,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,4.13090517239049,3.14408610199332,1.64481199199607,0,0.32592226663359,0.946895611469467,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0.741432815810302,0.267540828089713,0,0,0.766440987203842,2.06176467289578,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,4.23374160771938,5.61624411145365,7.09639579025715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,3.94061520403854,3.88129634747131,3.85029108839245,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0.318852545457645,0,0,0.423347165447766,0.324621940274555,0,0.456469358066384,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0.47748896947538,0.296964680832639,0,0,0.281338832821026,0.111308705022906,2.47205811340139,3.1668811219199,0,0,1.76352923497993,0,0.369254416383208,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.874813840149763,0.520874984799877,0,0.120596438625408,0,0.442317039724898,0.295547618953547,0.219385397153973,0.21787692703798,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0,1.20258735531594,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0,0.69647365264322,0,0.171986032471617,0,0,0.164230914106418,0,0.441280633457501,0,0,0.19871461170299,0.0633107959558787,0.782205530939212,0.0801588202515337,0,0,0.144090417154106,0.343609788497747,2.23073497220554,0.14405479798815,0.124252535565433,0,0,0,0.509991088181609,0.288950589901519,0,0,0,0,1.57732412567589,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0,0.492137407573744,0,0,0.136203406111576,0.643012593860077,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0.383830394638891,0,0,1.27134268827375,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0.197611631897944,0.852548188666271,0,0,0,0,0,0.942324577501406,0,0,0.1251909307065,0,0,0.0620964029413835,0.415045904808692,0.249960815924213,0.606596470166591,0.285465333544967,0,0,2.60857851499485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0.639471856518258,0.862598491173454,0.471797825567689,0.764467467344097,0,0.637724760305049,1.23935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0.943757786781923,0.183428598521679,0.231051332300676,0,0,0.596748666348824,0,0,0,0,0.163771917510097,0.443568258651136,0.135075169236789,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0.336283722218824,0,0.227662191351298,0,0.921871900446234,0.342976018874837,0,0.0657727735628491,0.236387681767936,0,0,0,0.280272163313789,0,0,0,0.142953088353313,1.42212250559454,0.23248285073625,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,1.63757624423474,4.3769170535501,0.356760272332706,1.24240690242856,0.329821550236287,0.754814217833368,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.299823467774787,0,0.352894871715692,0.0802413666891683,0,0,0,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0.378499274505237,0.437062287854782,2.4072715192173,0.305966489225945,0,0.275684698604535,0.250707539292375,0.227336094654718,0.803892390468535,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0.407016343054873,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr9:98271722..98271738,+ | |short_description=p@chr9:98271722..98271738,+ | ||
}} | }} |
Latest revision as of 03:46, 1 August 2015
Short description: | p@chr9:98271722..98271738, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:98271722..98271738, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.58e-25 | 3 |
pro-NK cell | 2.58e-25 | 3 |
T cell | 7.79e-20 | 25 |
pro-T cell | 7.79e-20 | 25 |
lymphoid lineage restricted progenitor cell | 3.73e-17 | 52 |
lymphocyte | 8.51e-17 | 53 |
common lymphoid progenitor | 8.51e-17 | 53 |
mature alpha-beta T cell | 4.78e-16 | 18 |
alpha-beta T cell | 4.78e-16 | 18 |
immature T cell | 4.78e-16 | 18 |
mature T cell | 4.78e-16 | 18 |
immature alpha-beta T cell | 4.78e-16 | 18 |
CD4-positive, alpha-beta T cell | 9.16e-13 | 6 |
CD8-positive, alpha-beta T cell | 2.05e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.04e-07 | 5 |