FFCP PHASE1:Hg19::chrX:118018841..118018849,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:118018841..118018849,+ | |||
|description=CAGE_peak_at_chrX:118018841..118018849,+ | |description=CAGE_peak_at_chrX:118018841..118018849,+ | ||
|id=chrX:118018841..118018849,+ | |id=chrX:118018841..118018849,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.08e-09!12;CL:0000417!1.08e-09!12;CL:0000668!1.08e-09!12;CL:0000414!1.08e-09!12;CL:0000412!1.08e-09!12;CL:0000182!1.08e-09!12;CL:0000066!2.10e-09!254;CL:0000223!3.71e-09!59;CL:1000415!9.67e-07!2 | |ontology_enrichment_celltype=CL:0000181!1.08e-09!12;CL:0000417!1.08e-09!12;CL:0000668!1.08e-09!12;CL:0000414!1.08e-09!12;CL:0000412!1.08e-09!12;CL:0000182!1.08e-09!12;CL:0000066!2.10e-09!254;CL:0000223!3.71e-09!59;CL:1000415!9.67e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;9.72e-14;2!CL:0000182;1.65e-08;12!CL:0000319;7.50e-08;1!CL:0000222;3.10e-07;1!CL:0002379;3.10e-07;1!CL:0000244;7.94e-07;4!CL:0000731;7.94e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.10e-13,2;CL:0000066,2.53e-11,253;CL:0000182,1.47e-08,12;CL:0000319,7.50e-08,1;CL:0002379,2.66e-07,1;CL:0000244,7.72e-07,4;CL:0000731,7.72e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.95e-09;30!UBERON:0009497;6.86e-08;13 | |||
|ontology_enrichment_disease=DOID:305!1.46e-17!106;DOID:0050687!1.36e-12!143;DOID:162!2.00e-09!235;DOID:14566!5.19e-09!239;DOID:7!6.34e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:3030;7.50e-08;1!DOID:5662;1.10e-07;1!DOID:3620;3.10e-07;1!DOID:3565;3.10e-07;1!DOID:1749;4.08e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.31e-17,106;DOID:0050687,3.80e-13,143;DOID:162,3.95e-09,235;DOID:14566,7.64e-09,239;DOID:3030,7.50e-08,1;DOID:5662,1.10e-07,1;DOID:3620,2.66e-07,1;DOID:3565,2.66e-07,1;DOID:1749,3.70e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005911!5.03e-17!82;UBERON:0003929!2.18e-15!54;UBERON:0004119!6.37e-15!169;UBERON:0000925!6.37e-15!169;UBERON:0006595!6.37e-15!169;UBERON:0009497!1.60e-12!25;UBERON:0000015!1.60e-12!25;UBERON:0002423!1.60e-12!25;UBERON:0006235!1.60e-12!25;UBERON:0004161!1.60e-12!25;UBERON:0001007!1.67e-10!155;UBERON:0001555!1.67e-10!155;UBERON:0007026!1.67e-10!155;UBERON:0007499!2.34e-10!25;UBERON:0009856!7.33e-10!26;UBERON:0008835!8.07e-10!22;UBERON:0003894!8.07e-10!22;UBERON:0009854!2.68e-09!23;UBERON:0002294!4.41e-09!7;UBERON:0001173!4.41e-09!7;UBERON:0004912!4.41e-09!7;UBERON:0004921!1.36e-08!129;UBERON:0004185!1.36e-08!129;UBERON:0002530!2.32e-08!59;UBERON:0000162!4.34e-08!14;UBERON:0001353!4.34e-08!14;UBERON:0000163!4.34e-08!14;UBERON:0006866!4.34e-08!14;UBERON:0000164!4.34e-08!14;UBERON:0000931!4.34e-08!14;UBERON:0000077!5.28e-08!130;UBERON:0002368!5.54e-08!35;UBERON:0002107!1.65e-07!19;UBERON:0006925!1.65e-07!19;UBERON:0008836!1.65e-07!19;UBERON:0004122!1.79e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;7.48e-15;25!UBERON:0002110;1.89e-09;3!UBERON:0002294;1.18e-08;7!UBERON:0001173;1.18e-08;7!UBERON:0002107;4.94e-08;19!UBERON:0006925;4.94e-08;19!UBERON:0002368;1.11e-07;33!UBERON:0000997;1.61e-07;1!UBERON:0005056;1.61e-07;1!UBERON:0004176;1.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,7.90e-16,82;UBERON:0009497,6.82e-15,25;UBERON:0000015,6.82e-15,25;UBERON:0002423,6.82e-15,25;UBERON:0006235,6.82e-15,25;UBERON:0004161,6.82e-15,25;UBERON:0003929,6.82e-12,54;UBERON:0007499,1.79e-11,25;UBERON:0009856,5.36e-11,26;UBERON:0008835,1.00e-09,22;UBERON:0003894,1.00e-09,22;UBERON:0002110,2.06e-09,3;UBERON:0006242,2.06e-09,3;UBERON:0009854,2.81e-09,23;UBERON:0004119,1.56e-08,160;UBERON:0000925,1.56e-08,160;UBERON:0006595,1.56e-08,160;UBERON:0002107,4.51e-08,19;UBERON:0006925,4.51e-08,19;UBERON:0008836,4.51e-08,19;UBERON:0002368,6.71e-08,35;UBERON:0005172,7.17e-08,54;UBERON:0005173,7.17e-08,54;UBERON:0005177,1.03e-07,101;UBERON:0000997,1.72e-07,1;UBERON:0005056,1.72e-07,1;UBERON:0001007,1.89e-07,145;UBERON:0001555,1.89e-07,145;UBERON:0007026,1.89e-07,145;UBERON:0002530,4.35e-07,59;UBERON:0002417,6.13e-07,60;UBERON:0000916,6.13e-07,60;UBERON:0002294,8.16e-07,9;UBERON:0001173,8.16e-07,9;UBERON:0004912,8.16e-07,9 | |||
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| ||
|short_description=p@chrX:118018841..118018849,+ | |short_description=p@chrX:118018841..118018849,+ | ||
}} | }} |
Latest revision as of 05:15, 1 August 2015
Short description: | p@chrX:118018841..118018849, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:118018841..118018849, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.10e-13 | 2 |
epithelial cell | 2.53e-11 | 253 |
hepatocyte | 1.47e-08 | 12 |
mucus secreting cell | 7.50e-08 | 1 |
meningothelial cell | 2.66e-07 | 1 |
transitional epithelial cell | 7.72e-07 | 4 |
urothelial cell | 7.72e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 7.90e-16 | 82 |
epithelium of foregut-midgut junction | 6.82e-15 | 25 |
anatomical boundary | 6.82e-15 | 25 |
hepatobiliary system | 6.82e-15 | 25 |
foregut-midgut junction | 6.82e-15 | 25 |
septum transversum | 6.82e-15 | 25 |
gut epithelium | 6.82e-12 | 54 |
epithelial sac | 1.79e-11 | 25 |
sac | 5.36e-11 | 26 |
hepatic diverticulum | 1.00e-09 | 22 |
liver primordium | 1.00e-09 | 22 |
gallbladder | 2.06e-09 | 3 |
gall bladder primordium | 2.06e-09 | 3 |
digestive tract diverticulum | 2.81e-09 | 23 |
endoderm-derived structure | 1.56e-08 | 160 |
endoderm | 1.56e-08 | 160 |
presumptive endoderm | 1.56e-08 | 160 |
liver | 4.51e-08 | 19 |
digestive gland | 4.51e-08 | 19 |
liver bud | 4.51e-08 | 19 |
endocrine gland | 6.71e-08 | 35 |
abdomen element | 7.17e-08 | 54 |
abdominal segment element | 7.17e-08 | 54 |
trunk region element | 1.03e-07 | 101 |
mammalian vulva | 1.72e-07 | 1 |
external female genitalia | 1.72e-07 | 1 |
digestive system | 1.89e-07 | 145 |
digestive tract | 1.89e-07 | 145 |
primitive gut | 1.89e-07 | 145 |
gland | 4.35e-07 | 59 |
abdominal segment of trunk | 6.13e-07 | 60 |
abdomen | 6.13e-07 | 60 |
biliary system | 8.16e-07 | 9 |
biliary tree | 8.16e-07 | 9 |
biliary bud | 8.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.31e-17 | 106 |
cell type cancer | 3.80e-13 | 143 |
cancer | 3.95e-09 | 235 |
disease of cellular proliferation | 7.64e-09 | 239 |
mucinous adenocarcinoma | 7.50e-08 | 1 |
pleomorphic carcinoma | 1.10e-07 | 1 |
central nervous system cancer | 2.66e-07 | 1 |
meningioma | 2.66e-07 | 1 |
squamous cell carcinoma | 3.70e-07 | 14 |