FFCP PHASE1:Hg19::chrY:13450855..13450866,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrY:13450855..13450866,+ | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chrY:13450855..13450866,+ | |||
|id=chrY:13450855..13450866,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.99e-29!8;CL:0002195!5.44e-19!2;CL:0002571!5.44e-19!2;CL:0000540!1.15e-14!6;CL:0000031!1.15e-14!6;CL:0000404!1.15e-14!6;CL:0000214!1.70e-13!3;CL:0000153!7.76e-10!9;CL:0000447!7.76e-10!9;CL:0002319!1.52e-08!25;CL:0000080!8.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.61e-50;2!CL:0000214;7.70e-34;3!CL:0000540;1.12e-17;6!CL:0000404;1.12e-17;6!CL:0002319;3.55e-15;25!CL:0000153;5.22e-12;9!CL:0000447;5.22e-12;9!CL:0000327;1.40e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.04e-50,8;CL:0000214,7.70e-34,3;CL:0000540,1.12e-17,6;CL:0000031,1.12e-17,6;CL:0000404,1.12e-17,6;CL:0002319,3.42e-15,25;CL:0000153,5.22e-12,9;CL:0000447,5.22e-12,9;CL:0000327,1.40e-07,15;CL:0000133,5.97e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.93e-26;1!CL:0000031;1.12e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!1.70e-13!3;UBERON:0002018!1.70e-13!3;UBERON:0002217!1.70e-13!3;UBERON:0007616!1.70e-13!3;UBERON:0003978!5.81e-13!3;UBERON:0009751!5.81e-13!3;UBERON:0000946!5.81e-13!3;UBERON:0002523!5.81e-13!3;UBERON:0005983!5.81e-13!3;UBERON:0002165!5.81e-13!3;UBERON:0002062!5.81e-13!3;UBERON:0007280!5.81e-13!3;UBERON:0002134!1.43e-10!1;UBERON:0005208!1.43e-10!1;UBERON:0005946!1.43e-10!1;UBERON:0005965!1.43e-10!1;UBERON:0002078!1.43e-10!1;UBERON:0002146!3.96e-10!1;UBERON:0005623!3.96e-10!1;UBERON:0002331!1.17e-08!10;UBERON:0000358!1.17e-08!10;UBERON:0000307!1.17e-08!10;UBERON:0000091!1.17e-08!10;UBERON:0000087!1.17e-08!10;UBERON:0007806!1.17e-08!10;UBERON:0008780!1.17e-08!10;UBERON:0005728!1.17e-08!10;UBERON:0004905!1.89e-08!5;UBERON:0000982!1.89e-08!5;UBERON:0004770!1.89e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;7.70e-34;3!UBERON:0007616;7.70e-34;3!UBERON:0002217;7.70e-34;3!UBERON:0002018;7.70e-34;3!UBERON:0004905;2.20e-13;8!UBERON:0000982;2.20e-13;8!UBERON:0004770;2.20e-13;8!UBERON:0004457;5.22e-12;9!UBERON:0000042;5.22e-12;9!UBERON:0000486;3.01e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,7.70e-34,3;UBERON:0007616,7.70e-34,3;UBERON:0002217,7.70e-34,3;UBERON:0002018,7.70e-34,3;UBERON:0004905,2.20e-13,8;UBERON:0000982,2.20e-13,8;UBERON:0004770,2.20e-13,8;UBERON:0004457,3.01e-09,12;UBERON:0000042,3.01e-09,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,3.90419561572865,6.95959931499926,0.670065061337395,29.3451825760455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,1.47775344708365,13.501090611356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chrY:13450855..13450866,+ | |||
}} |
Latest revision as of 10:00, 1 August 2015
Short description: | p@chrY:13450855..13450866, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrY:13450855..13450866, + |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.04e-50 | 8 |
synovial cell | 7.70e-34 | 3 |
neuron | 1.12e-17 | 6 |
neuroblast | 1.12e-17 | 6 |
electrically signaling cell | 1.12e-17 | 6 |
neural cell | 3.42e-15 | 25 |
GAG secreting cell | 5.22e-12 | 9 |
carbohydrate secreting cell | 5.22e-12 | 9 |
extracellular matrix secreting cell | 1.40e-07 | 15 |
neurectodermal cell | 5.97e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 7.70e-34 | 3 |
layer of synovial tissue | 7.70e-34 | 3 |
synovial joint | 7.70e-34 | 3 |
synovial membrane of synovial joint | 7.70e-34 | 3 |
articulation | 2.20e-13 | 8 |
skeletal joint | 2.20e-13 | 8 |
articular system | 2.20e-13 | 8 |
cavity lining | 3.01e-09 | 12 |
serous membrane | 3.01e-09 | 12 |