FFCP PHASE1:Mm9::chr2:118386175..118386178,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2325 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:118386175..118386178,+ | |||
|description=CAGE_peak_at_chr2:118386175..118386178,+ | |description=CAGE_peak_at_chr2:118386175..118386178,+ | ||
|id=chr2:118386175..118386178,+ | |id=chr2:118386175..118386178,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!2.23e-08!147;UBERON:0000926!6.92e-08!193;UBERON:0004120!6.92e-08!193;UBERON:0006603!6.92e-08!193;UBERON:0004177!4.33e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.65e-12,29;UBERON:0005057,2.65e-12,29;UBERON:0000077,4.43e-11,35;UBERON:0002390,1.98e-09,45;UBERON:0003061,1.98e-09,45;UBERON:0002193,3.43e-09,48;UBERON:0002405,3.43e-09,48;UBERON:0002370,4.40e-08,23;UBERON:0000974,4.40e-08,23;UBERON:0004807,4.40e-08,23;UBERON:0005058,4.40e-08,23;UBERON:0003351,4.40e-08,23;UBERON:0009113,4.40e-08,23;UBERON:0003295,4.40e-08,23;UBERON:0009722,4.40e-08,23;UBERON:0005562,4.40e-08,23;UBERON:0007690,4.40e-08,23;UBERON:0007811,1.05e-07,36;UBERON:0006562,1.45e-07,24;UBERON:0003408,1.45e-07,24;UBERON:0001557,1.45e-07,24;UBERON:0001042,1.45e-07,24;UBERON:0008814,1.45e-07,24;UBERON:0009145,1.45e-07,24;UBERON:0001041,2.12e-07,80;UBERON:0000065,3.05e-07,41;UBERON:0001004,6.28e-07,42;UBERON:0000153,8.37e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.84473233291,0,0.68487187290202,0,2.05440875917447,0,0.333109761815663,1.41732687172878,0.699561878128147,1.73504190947031,4.38766187538364,2.54633791078818,0,1.48936426801328,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,1.67412652294763,0,1.57057123192139,4.1176204162171,2.73218193983378,1.45653105909346,0,0,0,0,0,0,0,0,0,2.51673909086605,1.45072428402269,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,2.58127163094416,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0,0,1.29468941823586,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.904335843315735,1.88141931417128,0.502666365318702,1.23597483867187,0.289198713839823,0.884610551949874,0.323533699894818,1.32504911076236,1.45462575940567,1.86391761218122,0.878342391034642,1.25668024088073,0.255457055208591,1.43778149407104,0,1.65191295194984,0,0,0.376963056338593,0.173824320192276,0,0.62336413367868,0.162241263067758,0.407357455401265,1.36847667671102,0.758168275301024,0.631325567659422,0.260240885925407,0.689706313300419,0,1.50704817835715,1.76894897793452,3.58718416797579,1.68663104207512,1.03481348295606,0.215567992932842,0,0.175951124163949,0.657587197282725,1.11218899690239,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0.568326998791185,0.414251545071004,0,0.720248245844059,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.536546802799238,0.700592054203017,0.329119699826961,0.32833492815819,1.13496333364198,0.584799949701329,1.3173006917463,0.536825675041487,0.210289948564127,0.205809224758569,0,0,1.49301775374664,0,0,0.201683524623343,0,0.190225626112559,0,0.494096864172033,1.25667604400135,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.685491075658373,1.1270773567308,0.407302655690628,0.969762435838129,0.98190147846446,0.758838445491087,1.91893192373483,1.255989822731,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0.72353147925725,2.03700681425136,0.287696137450811,2.2698931748505,0.274561413188081,2.87536413054709,0,0,0.505157755894224,0.896987067609561,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,1.01847051465113,0.938760993154008,0.167506257441816,1.42826184531608,1.17080188714679,1.41871629695572,1.99318220683897,0.159454768657487,0.81931657357869,1.55416483679306,1.15719246865209,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0.963963949265421,0.709700426041343,0.35613120733451,0.81443479676788,0.494910368917606,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,1.29214146584111,0.727067458955011,2.13898427030833,1.26414703174326,1.05418608574999,0,2.04263763452273,0.720244376125241,0,0,0.354680467284547,0.713475270408282,0.987294123612726,0,0.469343416127421,1.0591603543191,0.441056796109924,0.32977250588296,2.26050197374268,0.542816324353403,1.55184047204077,1.31312719796049,0.582961673259701,0.18542530201051,1.53783792718067,1.44470807574256,1.11116716421827,4.33247451110789,1.36694227721025,3.20289442489132,2.54967644990783,0.979660166265606,1.65839968565309,0,0.474503990371703,0,0.540026704109006,0,1.52853794622324,1.21377911746339,0.495920734352016,0.26175594198403,0.388844919875379,0.621339313086926,0,0.747582730219894,0.165458490457098,0.972255941720238,0.387479470433193,0.337912250981556,0.938857909166032,0.781226309063701,0.629156066554265,0,0.288030006257865,4.74016680942267,0.608175645870493,1.1298205288131,1.55904987573354,1.61124026100733,2.18549490259391,5.4087952283986,7.82754494025259,4.4425237977185,5.71551049912499,7.25948532985252,7.50425681696094,8.56285390598932,7.36324483743884,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0.915758121336325,0.643105137237198,1.00314420807073,0,0,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0.824140228955577,0,0.505394423527595,0.25347929989024,0.943131706930381,0.0936415074698824,0.384150914429216,0.516919220600519,1.42888107384922,0.579421629724277,1.35036454324594,0.824171801606613,0.441596760403192,1.37147700954166,0.70990322463735,0.953744759789284,0.436039249896986,0.470546902076653,0.592302255241736,0.548783918618318,0.789209134313529,0.814824683075171,0.561142271657738,0.830445126869219,0.29551344712669,0,0.309873682371932,0.964533054905707,0.999242311751784,1.16965804222704,0.859484216193193,1.14772999241306,0.220591419119515,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0.84473233291,0,0.68487187290202,0,2.05440875917447,0,0.333109761815663,1.41732687172878,0.699561878128147,1.73504190947031,4.38766187538364,2.54633791078818,0,1.48936426801328,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,1.67412652294763,0,1.57057123192139,4.1176204162171,2.73218193983378,1.45653105909346,0,0,0,0,0,0,0,0,0,2.51673909086605,1.45072428402269,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,2.58127163094416,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0.253359865475099,0,0,1.29468941823586,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.904335843315735,1.88141931417128,0.502666365318702,1.23597483867187,0.289198713839823,0.884610551949874,0.323533699894818,1.32504911076236,1.45462575940567,1.86391761218122,0.878342391034642,1.25668024088073,0.255457055208591,1.43778149407104,0,1.65191295194984,0,0,0.376963056338593,0.173824320192276,0,0.62336413367868,0.162241263067758,0.407357455401265,1.36847667671102,0.758168275301024,0.631325567659422,0.260240885925407,0.689706313300419,0,1.50704817835715,1.76894897793452,3.58718416797579,1.68663104207512,1.03481348295606,0.215567992932842,0,0.175951124163949,0.657587197282725,1.11218899690239,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0.568326998791185,0.414251545071004,0,0.720248245844059,0.710234206755631,0.590292695242212,0.771335564436891,0.697601834251224,0.536546802799238,0.700592054203017,0.329119699826961,0.32833492815819,1.13496333364198,0.584799949701329,1.3173006917463,0.536825675041487,0.210289948564127,0.205809224758569,0,0,1.49301775374664,0,0,0.201683524623343,0,0.190225626112559,0,0.494096864172033,1.25667604400135,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.685491075658373,1.1270773567308,0.407302655690628,0.969762435838129,0.98190147846446,0.758838445491087,1.91893192373483,1.255989822731,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0.72353147925725,2.03700681425136,0.287696137450811,2.2698931748505,0.274561413188081,2.87536413054709,0,0,0.505157755894224,0.896987067609561,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,1.01847051465113,0.938760993154008,0.167506257441816,1.42826184531608,1.17080188714679,1.41871629695572,1.99318220683897,0.159454768657487,0.81931657357869,1.55416483679306,1.15719246865209,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0.963963949265421,0.709700426041343,0.35613120733451,0.81443479676788,0.494910368917606,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,1.29214146584111,0.727067458955011,2.13898427030833,1.26414703174326,1.05418608574999,0,2.04263763452273,0.720244376125241,0,0,0.354680467284547,0.713475270408282,0.987294123612726,0,0.469343416127421,1.0591603543191,0.441056796109924,0.32977250588296,2.26050197374268,0.542816324353403,1.55184047204077,1.31312719796049,0.582961673259701,0.18542530201051,1.53783792718067,1.44470807574256,1.11116716421827,4.33247451110789,1.36694227721025,3.20289442489132,2.54967644990783,0.979660166265606,1.65839968565309,0,0.474503990371703,0,0.540026704109006,0,1.52853794622324,1.21377911746339,0.495920734352016,0.26175594198403,0.388844919875379,0.621339313086926,0,0.747582730219894,0.165458490457098,0.972255941720238,0.387479470433193,0.337912250981556,0.938857909166032,0.781226309063701,0.629156066554265,0,0.288030006257865,4.74016680942267,0.608175645870493,1.1298205288131,1.55904987573354,1.61124026100733,2.18549490259391,5.4087952283986,7.82754494025259,4.4425237977185,5.71551049912499,7.25948532985252,7.50425681696094,8.56285390598932,7.36324483743884,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0.915758121336325,0.643105137237198,1.00314420807073,0,0,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0.824140228955577,0,0.505394423527595,0.25347929989024,0.943131706930381,0.0936415074698824,0.384150914429216,0.516919220600519,1.42888107384922,0.579421629724277,1.35036454324594,0.824171801606613,0.441596760403192,1.37147700954166,0.70990322463735,0.953744759789284,0.436039249896986,0.470546902076653,0.592302255241736,0.548783918618318,0.789209134313529,0.814824683075171,0.561142271657738,0.830445126869219,0.29551344712669,0,0.309873682371932,0.964533054905707,0.999242311751784,1.16965804222704,0.859484216193193,1.14772999241306,0.220591419119515,0.927471342481686 | ||
|short_description=p@chr2:118386175..118386178,+ | |short_description=p@chr2:118386175..118386178,+ | ||
}} | }} |
Latest revision as of 19:59, 3 August 2015
Short description: | p@chr2:118386175..118386178, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:118386175..118386178, + |
Coexpression cluster: | MCL_coexpression_mm9:2325 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.65e-12 | 29 |
immune organ | 2.65e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 4.43e-11 | 35 |
hematopoietic system | 1.98e-09 | 45 |
blood island | 1.98e-09 | 45 |
hemolymphoid system | 3.43e-09 | 48 |
immune system | 3.43e-09 | 48 |
thymus | 4.40e-08 | 23 |
neck | 4.40e-08 | 23 |
respiratory system epithelium | 4.40e-08 | 23 |
hemolymphoid system gland | 4.40e-08 | 23 |
pharyngeal epithelium | 4.40e-08 | 23 |
thymic region | 4.40e-08 | 23 |
pharyngeal gland | 4.40e-08 | 23 |
entire pharyngeal arch endoderm | 4.40e-08 | 23 |
thymus primordium | 4.40e-08 | 23 |
early pharyngeal endoderm | 4.40e-08 | 23 |
craniocervical region | 1.05e-07 | 36 |
pharynx | 1.45e-07 | 24 |
gland of gut | 1.45e-07 | 24 |
upper respiratory tract | 1.45e-07 | 24 |
chordate pharynx | 1.45e-07 | 24 |
pharyngeal arch system | 1.45e-07 | 24 |
pharyngeal region of foregut | 1.45e-07 | 24 |
foregut | 2.12e-07 | 80 |
respiratory tract | 3.05e-07 | 41 |
respiratory system | 6.28e-07 | 42 |
anterior region of body | 8.37e-07 | 43 |