FFCP PHASE1:Mm9::chr17:15968136..15968159,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3077 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:15968136..15968159,- | |||
|description=CAGE_peak_at_chr17:15968136..15968159,- | |description=CAGE_peak_at_chr17:15968136..15968159,- | ||
|id=chr17:15968136..15968159,- | |id=chr17:15968136..15968159,- | ||
|ontology_enrichment_celltype=CL:0000540!7.70e-17!33;CL:0000047!7.70e-17!33;CL:0000031!7.70e-17!33;CL:0000404!7.70e-17!33;CL:0000393!1.23e-12!39;CL:0000211!1.23e-12!39;CL:0000221!3.39e-10!44;CL:0000133!3.39e-10!44;CL:0002319!4.70e-10!43;CL:0000117!5.13e-10!23;CL:0000337!5.13e-10!23;CL:0000107!2.45e-08!9;CL:0000055!2.63e-07!50 | |ontology_enrichment_celltype=CL:0000540!7.70e-17!33;CL:0000047!7.70e-17!33;CL:0000031!7.70e-17!33;CL:0000404!7.70e-17!33;CL:0000393!1.23e-12!39;CL:0000211!1.23e-12!39;CL:0000221!3.39e-10!44;CL:0000133!3.39e-10!44;CL:0002319!4.70e-10!43;CL:0000117!5.13e-10!23;CL:0000337!5.13e-10!23;CL:0000107!2.45e-08!9;CL:0000055!2.63e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.73e-33,33;CL:0000047,3.73e-33,33;CL:0000031,3.73e-33,33;CL:0000404,3.73e-33,33;CL:0000393,3.72e-27,39;CL:0000211,3.72e-27,39;CL:0002319,4.35e-24,43;CL:0000221,2.08e-23,44;CL:0000133,2.08e-23,44;CL:0000107,2.83e-21,9;CL:0000117,1.35e-16,23;CL:0000337,1.35e-16,23;CL:0002321,1.39e-12,70;CL:0000723,2.11e-08,91;CL:0000048,2.11e-08,91;CL:0000120,2.96e-08,3;CL:0002613,2.96e-08,3;CL:0000034,1.51e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!2.45e-08!9;UBERON:0001017!2.51e-08!73;UBERON:0005743!2.51e-08!73;UBERON:0004121!2.67e-08!102;UBERON:0000924!2.67e-08!102;UBERON:0006601!2.67e-08!102;UBERON:0000073!5.17e-08!75;UBERON:0001016!5.17e-08!75;UBERON:0000010!9.16e-07!11 | |ontology_enrichment_uberon=UBERON:0002410!2.45e-08!9;UBERON:0001017!2.51e-08!73;UBERON:0005743!2.51e-08!73;UBERON:0004121!2.67e-08!102;UBERON:0000924!2.67e-08!102;UBERON:0006601!2.67e-08!102;UBERON:0000073!5.17e-08!75;UBERON:0001016!5.17e-08!75;UBERON:0000010!9.16e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.83e-21,9;UBERON:0000010,4.70e-17,11;UBERON:0001017,9.60e-16,73;UBERON:0001016,3.72e-15,75;UBERON:0004121,1.20e-10,95;UBERON:0000924,1.20e-10,95;UBERON:0006601,1.20e-10,95;UBERON:0000013,1.23e-08,3;UBERON:0010313,3.48e-08,3;UBERON:0002342,3.48e-08,3;UBERON:0002005,3.48e-08,3;UBERON:0005428,3.48e-08,3;UBERON:0005062,3.48e-08,3;UBERON:0000011,1.17e-07,3;UBERON:0002020,7.90e-07,34 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.664938581433969,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,2.11596391708813,6.33831403506179,0.677689064138264,0.889294796111139,0,0,0,0,0,0.518448061542388,1.08004750665353,1.05162480675691,0.571301968807607,1.10434270475807,1.22490799214954,1.24599112323707,0,2.20231761998777,0.127687338085188,0.307213066512487,3.03338461779446,2.92760459527711,3.64639359389732,0.558365998002762,0,0.30559649555362,0.589257170947335,1.42371680799103,2.42319279572891,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.913396434936424,0.691846491768175,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.753926112677186,0.173824320192276,0,0,0,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0.689706313300419,0.720248519221397,0.452114453507145,0.0680364991513279,0.2562274405697,0.374806898238915,0,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0.841159794256509,1.23485534855141,0,0.264450566663544,0.213288250535234,0.696710015581316,0.644337306610467,1.21010114774006,0.444756087689741,1.33157938278791,0.474529061544512,1.4822905925161,1.00534083520108,1.98956472041151,0.58489226135736,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0.160550589987792,0.703270119553219,0,0.252470927204373,2.2085575359138,2.73307121007647,5.38558494331997,2.62865677747807,1.78238939265915,1.69845918473299,5.26253912177363,9.05993159525067,8.69633111482352,0,0,0,0.488660878060728,0.164970122972535,1.32745138339963,0,0.604647113929502,0,0,0.307435147943927,0,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0,0.540183282093931,0.646793418913773,0.857348140126369,0,0,0.164549020602121,1.2178597964584,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0.164140899745061,0.582961673259701,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.949007980743406,2.03319467126849,0.86404272657441,0.836353184057875,1.09181281873089,0.674321731924103,0.661227645802687,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0.501572104035363,1.12950368523413,0,0,0.515559547031063,0,0,0,0,0.906284817968409,0,1.45302286617847,1.99512436700516,1.36586884603307,0.486213434136588,0.209613162627982,0.735374033800057,0,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.943131706930381,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.927074607558844,1.15745532278223,0.412085900803307,0.588795680537589,0,0.887379030796687,0.238436189947321,1.0174249164263,0.470546902076653,0.592302255241736,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.689531376628944,0.409231043169689,0.464810523557898,0.385813221962283,0.999242311751784,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr17:15968136..15968159,- | |short_description=p@chr17:15968136..15968159,- | ||
}} | }} |
Latest revision as of 08:33, 4 August 2015
Short description: | p@chr17:15968136..15968159, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:15968136..15968159, - |
Coexpression cluster: | MCL_coexpression_mm9:3077 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.73e-33 | 33 |
neuronal stem cell | 3.73e-33 | 33 |
neuroblast | 3.73e-33 | 33 |
electrically signaling cell | 3.73e-33 | 33 |
electrically responsive cell | 3.72e-27 | 39 |
electrically active cell | 3.72e-27 | 39 |
neural cell | 4.35e-24 | 43 |
ectodermal cell | 2.08e-23 | 44 |
neurectodermal cell | 2.08e-23 | 44 |
autonomic neuron | 2.83e-21 | 9 |
CNS neuron (sensu Vertebrata) | 1.35e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-16 | 23 |
embryonic cell | 1.39e-12 | 70 |
somatic stem cell | 2.11e-08 | 91 |
multi fate stem cell | 2.11e-08 | 91 |
granule cell | 2.96e-08 | 3 |
striatum neuron | 2.96e-08 | 3 |
stem cell | 1.51e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.83e-21 | 9 |
peripheral nervous system | 4.70e-17 | 11 |
central nervous system | 9.60e-16 | 73 |
nervous system | 3.72e-15 | 75 |
ectoderm-derived structure | 1.20e-10 | 95 |
ectoderm | 1.20e-10 | 95 |
presumptive ectoderm | 1.20e-10 | 95 |
sympathetic nervous system | 1.23e-08 | 3 |
neural crest-derived structure | 3.48e-08 | 3 |
neural crest | 3.48e-08 | 3 |
enteric nervous system | 3.48e-08 | 3 |
vagal neural crest | 3.48e-08 | 3 |
neural fold | 3.48e-08 | 3 |
parasympathetic nervous system | 1.17e-07 | 3 |
gray matter | 7.90e-07 | 34 |