FFCP PHASE1:Mm9::chr9:107554554..107554565,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:107554554..107554565,- to FFCP PHASE1:Mm9::chr9:107554554..107554565,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=111 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:107554554..107554565,- | |||
|description=CAGE_peak_at_chr9:107554554..107554565,- | |||
|id=chr9:107554554..107554565,- | |||
|ontology_enrichment_celltype=CL:0000181!9.48e-07!5;CL:0000417!9.48e-07!5;CL:0000668!9.48e-07!5;CL:0000412!9.48e-07!5;CL:0000182!9.48e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.26e-24,5;CL:0000878,4.36e-15,2;CL:0000129,4.36e-15,2;CL:0002194,5.19e-08,4;CL:0000766,5.19e-08,4;CL:0000234,5.19e-08,4;CL:0000576,5.19e-08,4;CL:0000235,5.19e-08,4;CL:0000864,5.19e-08,4;CL:0002009,5.19e-08,4;CL:0000040,5.19e-08,4;CL:0000559,5.19e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.24e-12!22;UBERON:0007499!4.24e-12!22;UBERON:0006925!4.24e-12!22;UBERON:0009497!4.24e-12!22;UBERON:0000015!4.24e-12!22;UBERON:0002423!4.24e-12!22;UBERON:0006235!4.24e-12!22;UBERON:0008835!4.24e-12!22;UBERON:0003894!4.24e-12!22;UBERON:0004161!4.24e-12!22;UBERON:0008836!4.24e-12!22;UBERON:0009854!2.05e-11!23;UBERON:0009856!2.05e-11!23;UBERON:0002365!3.25e-10!25;UBERON:0002330!3.25e-10!25;UBERON:0005172!2.53e-07!49;UBERON:0005173!2.53e-07!49;UBERON:0002417!2.53e-07!49;UBERON:0000916!2.53e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.38e-26,22;UBERON:0007499,1.38e-26,22;UBERON:0006925,1.38e-26,22;UBERON:0009497,1.38e-26,22;UBERON:0000015,1.38e-26,22;UBERON:0002423,1.38e-26,22;UBERON:0006235,1.38e-26,22;UBERON:0008835,1.38e-26,22;UBERON:0003894,1.38e-26,22;UBERON:0004161,1.38e-26,22;UBERON:0008836,1.38e-26,22;UBERON:0009854,2.10e-25,23;UBERON:0009856,2.10e-25,23;UBERON:0002365,2.53e-23,25;UBERON:0002330,2.53e-23,25;UBERON:0005256,1.18e-12,45;UBERON:0003914,4.41e-12,47;UBERON:0005172,1.47e-11,49;UBERON:0005173,1.47e-11,49;UBERON:0002417,1.47e-11,49;UBERON:0000916,1.47e-11,49;UBERON:0003929,3.28e-10,55;UBERON:0002368,2.72e-09,60;UBERON:0003104,3.98e-09,61;UBERON:0009142,3.98e-09,61;UBERON:0002530,1.63e-08,65;UBERON:0000490,2.26e-08,66;UBERON:0009569,2.26e-08,66;UBERON:0005911,5.70e-08,69;UBERON:0000949,1.33e-07,72;UBERON:0005177,7.53e-07,79;UBERON:0001041,9.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,1.53687322128622,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,4.0798280022465,3.77792234146472,3.89865850468601,1.79210754838934,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.204109497453984,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.616985819609003,0.296452627087149,0,0,0,0,0,0.50925170356284,0,4.37765112292595,0,2.87536413054709,2.23284568601102,0.624075346229121,1.01031551178845,0.896987067609561,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,1.53687322128622,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,4.0798280022465,3.77792234146472,3.89865850468601,1.79210754838934,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.204109497453984,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.616985819609003,0.296452627087149,0,0,0,0,0,0.50925170356284,0,4.37765112292595,0,2.87536413054709,2.23284568601102,0.624075346229121,1.01031551178845,0.896987067609561,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr9:107554554..107554565,- | |||
}} | }} |
Latest revision as of 13:01, 4 August 2015
Short description: | p@chr9:107554554..107554565, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:107554554..107554565, - |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.26e-24 | 5 |
central nervous system macrophage | 4.36e-15 | 2 |
microglial cell | 4.36e-15 | 2 |
monopoietic cell | 5.19e-08 | 4 |
myeloid leukocyte | 5.19e-08 | 4 |
phagocyte | 5.19e-08 | 4 |
monocyte | 5.19e-08 | 4 |
macrophage | 5.19e-08 | 4 |
tissue-resident macrophage | 5.19e-08 | 4 |
macrophage dendritic cell progenitor | 5.19e-08 | 4 |
monoblast | 5.19e-08 | 4 |
promonocyte | 5.19e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 1.38e-26 | 22 |
epithelial sac | 1.38e-26 | 22 |
digestive gland | 1.38e-26 | 22 |
epithelium of foregut-midgut junction | 1.38e-26 | 22 |
anatomical boundary | 1.38e-26 | 22 |
hepatobiliary system | 1.38e-26 | 22 |
foregut-midgut junction | 1.38e-26 | 22 |
hepatic diverticulum | 1.38e-26 | 22 |
liver primordium | 1.38e-26 | 22 |
septum transversum | 1.38e-26 | 22 |
liver bud | 1.38e-26 | 22 |
digestive tract diverticulum | 2.10e-25 | 23 |
sac | 2.10e-25 | 23 |
exocrine gland | 2.53e-23 | 25 |
exocrine system | 2.53e-23 | 25 |
trunk mesenchyme | 1.18e-12 | 45 |
epithelial tube | 4.41e-12 | 47 |
abdomen element | 1.47e-11 | 49 |
abdominal segment element | 1.47e-11 | 49 |
abdominal segment of trunk | 1.47e-11 | 49 |
abdomen | 1.47e-11 | 49 |
gut epithelium | 3.28e-10 | 55 |
endocrine gland | 2.72e-09 | 60 |
mesenchyme | 3.98e-09 | 61 |
entire embryonic mesenchyme | 3.98e-09 | 61 |
gland | 1.63e-08 | 65 |
unilaminar epithelium | 2.26e-08 | 66 |
subdivision of trunk | 2.26e-08 | 66 |
endo-epithelium | 5.70e-08 | 69 |
endocrine system | 1.33e-07 | 72 |
trunk region element | 7.53e-07 | 79 |
foregut | 9.41e-07 | 80 |