FFCP PHASE1:Mm9::chr9:108941664..108941692,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:108941664..108941692,- | |||
|description=CAGE_peak_at_chr9:108941664..108941692,- | |description=CAGE_peak_at_chr9:108941664..108941692,- | ||
|id=chr9:108941664..108941692,- | |id=chr9:108941664..108941692,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.61e-12,19;CL:0000557,1.95e-09,7;CL:0000034,5.51e-09,97;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1;CL:0000988,2.58e-07,32;CL:0002032,2.58e-07,32;CL:0000037,2.58e-07,32;CL:0000837,2.58e-07,32;CL:0002320,9.53e-07,46;CL:0000134,9.53e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.14e-09,3;DOID:4045,1.14e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1;UBERON:0002384,9.53e-07,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5626706890476,1.0470474879476,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0,0,0,0,0,0,0.335565212115473,0,0,0.514518872071894,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.37863096666592,0.226714680320357,21.7398366526258,0.860423876981386,0,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.517875767294343,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,1.79970819298022,1.52484272487678,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,2.1066395619397,2.57347907114715,2.55747149456033,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0.658239399653922,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.616985819609003,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0.54390568381871,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0.65954501176592,0.645857706783622,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0,0.170870880797853,0.412773735926445,0,0.188368457004691,0.136694227721025,0,4.24946074984638,5.45810664062266,3.45499934511059,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0.25347929989024,0.377252682772152,0,0.192075457214608,0.114870937911227,0,0.463537303779422,0,0,0,0.685738504770831,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | |phase1_expression=0,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5626706890476,1.0470474879476,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0,0,0,0,0,0,0.335565212115473,0,0,0.514518872071894,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.37863096666592,0.226714680320357,21.7398366526258,0.860423876981386,0,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.517875767294343,0.29688427812965,0,0,0,0.150722640552623,0.470354828542819,0.251333182659351,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0,0,0.255457055208591,1.07833612055328,1.79970819298022,1.52484272487678,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,2.1066395619397,2.57347907114715,2.55747149456033,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0.658239399653922,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.616985819609003,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0.54390568381871,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0.65954501176592,0.645857706783622,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0,0.170870880797853,0.412773735926445,0,0.188368457004691,0.136694227721025,0,4.24946074984638,5.45810664062266,3.45499934511059,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0.25347929989024,0.377252682772152,0,0.192075457214608,0.114870937911227,0,0.463537303779422,0,0,0,0.685738504770831,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | ||
|short_description=p@chr9:108941664..108941692,- | |short_description=p@chr9:108941664..108941692,- | ||
}} | }} |
Latest revision as of 14:12, 4 August 2015
Short description: | p@chr9:108941664..108941692, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108941664..108941692, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.61e-12 | 19 |
granulocyte monocyte progenitor cell | 1.95e-09 | 7 |
stem cell | 5.51e-09 | 97 |
lining cell | 1.56e-08 | 1 |
meso-epithelial cell | 1.56e-08 | 1 |
endothelial cell | 1.56e-08 | 1 |
endothelial cell of sinusoid | 1.56e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.56e-08 | 1 |
hematopoietic cell | 2.58e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.58e-07 | 32 |
hematopoietic stem cell | 2.58e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.58e-07 | 32 |
connective tissue cell | 9.53e-07 | 46 |
mesenchymal cell | 9.53e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.56e-08 | 1 |
hepatic sinusoid | 1.56e-08 | 1 |
parenchyma | 1.56e-08 | 1 |
abdomen blood vessel | 1.56e-08 | 1 |
sinusoid | 1.56e-08 | 1 |
digestive system duct | 1.56e-08 | 1 |
abdominal segment blood vessel | 1.56e-08 | 1 |
trunk blood vessel | 1.56e-08 | 1 |
liver parenchyma | 1.56e-08 | 1 |
liver lobule | 1.56e-08 | 1 |
biliary system | 1.56e-08 | 1 |
biliary tree | 1.56e-08 | 1 |
biliary bud | 1.56e-08 | 1 |
hepatic duct | 1.56e-08 | 1 |
connective tissue | 9.53e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.14e-09 | 3 |
muscle cancer | 1.14e-09 | 3 |