Personal tools

FFCP PHASE1:Mm9::chr2:178190136..178190151,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=98
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr2:178190136..178190151,+
|description=CAGE_peak_at_chr2:178190136..178190151,+
|description=CAGE_peak_at_chr2:178190136..178190151,+
|id=chr2:178190136..178190151,+
|id=chr2:178190136..178190151,+
|ontology_enrichment_celltype=CL:0000192!1.10e-08!3;CL:0000359!1.10e-08!3;CL:0002539!1.10e-08!3;CL:0000514!1.10e-08!3
|ontology_enrichment_celltype_v019_2=CL:0000192,1.18e-44,3;CL:0000359,1.18e-44,3;CL:0002539,1.18e-44,3;CL:0000514,1.18e-44,3;CL:0000680,8.13e-23,6;CL:0000187,8.13e-23,6;CL:0000056,8.13e-23,6;CL:0000222,1.10e-19,7;CL:0000355,1.69e-15,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001135!1.10e-08!3;UBERON:0004237!1.10e-08!3;UBERON:0004695!1.10e-08!3;UBERON:0002111!1.10e-08!3;UBERON:0004178!1.10e-08!3
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.18e-44,3;UBERON:0004237,1.18e-44,3;UBERON:0004695,1.18e-44,3;UBERON:0002111,1.18e-44,3;UBERON:0004178,1.18e-44,3;UBERON:0000947,9.53e-34,4;UBERON:0001637,9.53e-34,4;UBERON:0004573,9.53e-34,4;UBERON:0003509,9.53e-34,4;UBERON:0004571,9.53e-34,4;UBERON:0010191,9.53e-34,4;UBERON:0004572,9.53e-34,4;UBERON:0000055,3.42e-27,5;UBERON:0007500,3.42e-27,5;UBERON:0001981,3.42e-27,5;UBERON:0002049,3.42e-27,5;UBERON:0007798,3.42e-27,5;UBERON:0004537,3.42e-27,5;UBERON:0006965,3.42e-27,5;UBERON:0001134,1.69e-15,9;UBERON:0002036,1.69e-15,9;UBERON:0002385,1.69e-15,9;UBERON:0000486,1.69e-15,9;UBERON:0007503,1.69e-15,9;UBERON:0001015,1.69e-15,9;UBERON:0002329,1.69e-15,9;UBERON:0003082,1.69e-15,9;UBERON:0003059,1.69e-15,9;UBERON:0007282,1.69e-15,9;UBERON:0004290,1.69e-15,9;UBERON:0009618,1.69e-15,9;UBERON:0000383,4.97e-14,10;UBERON:0007524,7.94e-13,11;UBERON:0003077,7.94e-13,11;UBERON:0007285,7.94e-13,11
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56098362233926,7.40051597902456,6.79122982998222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,1.41335829804136,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,2.25415471346161,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655739781506702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56098362233926,7.40051597902456,6.79122982998222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,1.41335829804136,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,2.25415471346161,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655739781506702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0
|short_description=p@chr2:178190136..178190151,+
|short_description=p@chr2:178190136..178190151,+
}}
}}

Latest revision as of 16:57, 4 August 2015

Short description:p@chr2:178190136..178190151, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:178190136..178190151, +
Coexpression cluster:MCL_coexpression_mm9:98
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
2
4
6
8
10




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data