FFCP PHASE1:Mm9::chr7:20282325..20282339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20282325..20282339,+ | |||
|description=CAGE_peak_at_chr7:20282325..20282339,+ | |description=CAGE_peak_at_chr7:20282325..20282339,+ | ||
|id=chr7:20282325..20282339,+ | |id=chr7:20282325..20282339,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.64e-09,8;CL:0002194,3.01e-09,4;CL:0000766,3.01e-09,4;CL:0000234,3.01e-09,4;CL:0000576,3.01e-09,4;CL:0000235,3.01e-09,4;CL:0000864,3.01e-09,4;CL:0002009,3.01e-09,4;CL:0000040,3.01e-09,4;CL:0000559,3.01e-09,4;CL:0000182,1.10e-08,5;CL:0002092,2.14e-08,3;CL:0002540,2.14e-08,3;CL:0000219,1.30e-07,54;CL:0000333,1.82e-07,10;CL:0000095,1.82e-07,10;CL:0000243,1.82e-07,10;CL:0000123,1.82e-07,10;CL:0000125,1.82e-07,10;CL:0000030,1.82e-07,10;CL:0000339,1.82e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.38e-14!22;UBERON:0007499!9.38e-14!22;UBERON:0006925!9.38e-14!22;UBERON:0009497!9.38e-14!22;UBERON:0000015!9.38e-14!22;UBERON:0002423!9.38e-14!22;UBERON:0006235!9.38e-14!22;UBERON:0008835!9.38e-14!22;UBERON:0003894!9.38e-14!22;UBERON:0004161!9.38e-14!22;UBERON:0008836!9.38e-14!22;UBERON:0009854!1.00e-12!23;UBERON:0009856!1.00e-12!23;UBERON:0002365!3.34e-12!25;UBERON:0002330!3.34e-12!25;UBERON:0000025!2.30e-10!114;UBERON:0004111!2.18e-09!122;UBERON:0001017!2.72e-08!73;UBERON:0005743!2.72e-08!73;UBERON:0005172!5.15e-08!49;UBERON:0005173!5.15e-08!49;UBERON:0002417!5.15e-08!49;UBERON:0000916!5.15e-08!49;UBERON:0000073!1.14e-07!75;UBERON:0001016!1.14e-07!75;UBERON:0005256!3.36e-07!47;UBERON:0002021!6.29e-07!10;UBERON:0000411!6.29e-07!10;UBERON:0001950!6.29e-07!10;UBERON:0002405!8.35e-07!70 | |ontology_enrichment_uberon=UBERON:0002107!9.38e-14!22;UBERON:0007499!9.38e-14!22;UBERON:0006925!9.38e-14!22;UBERON:0009497!9.38e-14!22;UBERON:0000015!9.38e-14!22;UBERON:0002423!9.38e-14!22;UBERON:0006235!9.38e-14!22;UBERON:0008835!9.38e-14!22;UBERON:0003894!9.38e-14!22;UBERON:0004161!9.38e-14!22;UBERON:0008836!9.38e-14!22;UBERON:0009854!1.00e-12!23;UBERON:0009856!1.00e-12!23;UBERON:0002365!3.34e-12!25;UBERON:0002330!3.34e-12!25;UBERON:0000025!2.30e-10!114;UBERON:0004111!2.18e-09!122;UBERON:0001017!2.72e-08!73;UBERON:0005743!2.72e-08!73;UBERON:0005172!5.15e-08!49;UBERON:0005173!5.15e-08!49;UBERON:0002417!5.15e-08!49;UBERON:0000916!5.15e-08!49;UBERON:0000073!1.14e-07!75;UBERON:0001016!1.14e-07!75;UBERON:0005256!3.36e-07!47;UBERON:0002021!6.29e-07!10;UBERON:0000411!6.29e-07!10;UBERON:0001950!6.29e-07!10;UBERON:0002405!8.35e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.11e-25,22;UBERON:0007499,7.11e-25,22;UBERON:0006925,7.11e-25,22;UBERON:0009497,7.11e-25,22;UBERON:0000015,7.11e-25,22;UBERON:0002423,7.11e-25,22;UBERON:0006235,7.11e-25,22;UBERON:0008835,7.11e-25,22;UBERON:0003894,7.11e-25,22;UBERON:0004161,7.11e-25,22;UBERON:0008836,7.11e-25,22;UBERON:0009854,1.29e-23,23;UBERON:0009856,1.29e-23,23;UBERON:0002365,2.13e-21,25;UBERON:0002330,2.13e-21,25;UBERON:0000025,4.34e-11,114;UBERON:0005256,4.06e-10,45;UBERON:0004111,6.55e-10,122;UBERON:0003914,1.60e-09,47;UBERON:0005172,5.59e-09,49;UBERON:0005173,5.59e-09,49;UBERON:0002417,5.59e-09,49;UBERON:0000916,5.59e-09,49;UBERON:0003929,1.37e-07,55 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,1.52617609466313,0.439372365468944,1.94429899074283,0.419959264876088,2.87505128729943,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,22.9474427906757,12.8552627133707,23.4458437932213,9.28760342607055,8.4528027170742,0,0,0.210324961351382,1.99955689082663,1.10434270475807,0.122490799214954,0,0,0,0.510749352340751,1.0752457327937,0,0,0,0.558365998002762,3.37657566019008,3.36156145108982,0.883885756421003,1.70846016958924,0,0,0,0.579728977403356,11.185510400758,14.9593693415705,18.3499085156858,51.3323369783659,31.3618820968135,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,2.74041311325744,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.150722640552623,0,0.251333182659351,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.62336413367868,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.162137619091711,0.438599962275997,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.252946148497029,0,0.156998727841375,0.123397163921801,14.2297261001831,0,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,2.80088436959562,1.43848068725405,3.89124544260085,13.453509246216,8.62609239164127,9.30352369171258,13.1055822708115,6.06189307073068,6.09951205974501,14.9557491622644,0,0,0.325929952884052,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,3.01582567878545,1.63171705145613,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0.955875191810208,0.891194696329576,0.283076530788832,0,0.876767573733936,0.395287777946524,0.321321316421807,0,0.890328018336276,0.162886959353576,0,0,0,0.604647113929502,0,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0.477489376012546,0.164140899745061,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.487289403698762,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,1.38097570952153,0.572895513439397,0.859265911718438,2.74033007908257,0.755393897389701,1.35004500046361,1.35096360967266,1.81256963593682,1.03552062350364,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0.385813221962283,0.249810577937946,0.701794825336225,0,0,0.882365676478062,0 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,1.52617609466313,0.439372365468944,1.94429899074283,0.419959264876088,2.87505128729943,0,0,0,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,22.9474427906757,12.8552627133707,23.4458437932213,9.28760342607055,8.4528027170742,0,0,0.210324961351382,1.99955689082663,1.10434270475807,0.122490799214954,0,0,0,0.510749352340751,1.0752457327937,0,0,0,0.558365998002762,3.37657566019008,3.36156145108982,0.883885756421003,1.70846016958924,0,0,0,0.579728977403356,11.185510400758,14.9593693415705,18.3499085156858,51.3323369783659,31.3618820968135,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,2.74041311325744,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.150722640552623,0,0.251333182659351,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.62336413367868,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.162137619091711,0.438599962275997,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.252946148497029,0,0.156998727841375,0.123397163921801,14.2297261001831,0,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,2.80088436959562,1.43848068725405,3.89124544260085,13.453509246216,8.62609239164127,9.30352369171258,13.1055822708115,6.06189307073068,6.09951205974501,14.9557491622644,0,0,0.325929952884052,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0.433947175744535,3.01582567878545,1.63171705145613,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0,0,0.215423397732799,0.955875191810208,0.891194696329576,0.283076530788832,0,0.876767573733936,0.395287777946524,0.321321316421807,0,0.890328018336276,0.162886959353576,0,0,0,0.604647113929502,0,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0.477489376012546,0.164140899745061,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.487289403698762,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,1.38097570952153,0.572895513439397,0.859265911718438,2.74033007908257,0.755393897389701,1.35004500046361,1.35096360967266,1.81256963593682,1.03552062350364,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0.385813221962283,0.249810577937946,0.701794825336225,0,0,0.882365676478062,0 | ||
|short_description=p@chr7:20282325..20282339,+ | |short_description=p@chr7:20282325..20282339,+ | ||
}} | }} |
Latest revision as of 18:26, 4 August 2015
Short description: | p@chr7:20282325..20282339, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282325..20282339, + |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.64e-09 | 8 |
monopoietic cell | 3.01e-09 | 4 |
myeloid leukocyte | 3.01e-09 | 4 |
phagocyte | 3.01e-09 | 4 |
monocyte | 3.01e-09 | 4 |
macrophage | 3.01e-09 | 4 |
tissue-resident macrophage | 3.01e-09 | 4 |
macrophage dendritic cell progenitor | 3.01e-09 | 4 |
monoblast | 3.01e-09 | 4 |
promonocyte | 3.01e-09 | 4 |
hepatocyte | 1.10e-08 | 5 |
bone marrow cell | 2.14e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.14e-08 | 3 |
motile cell | 1.30e-07 | 54 |
migratory neural crest cell | 1.82e-07 | 10 |
neuron associated cell | 1.82e-07 | 10 |
glial cell (sensu Vertebrata) | 1.82e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.82e-07 | 10 |
glial cell | 1.82e-07 | 10 |
glioblast | 1.82e-07 | 10 |
glioblast (sensu Vertebrata) | 1.82e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 7.11e-25 | 22 |
epithelial sac | 7.11e-25 | 22 |
digestive gland | 7.11e-25 | 22 |
epithelium of foregut-midgut junction | 7.11e-25 | 22 |
anatomical boundary | 7.11e-25 | 22 |
hepatobiliary system | 7.11e-25 | 22 |
foregut-midgut junction | 7.11e-25 | 22 |
hepatic diverticulum | 7.11e-25 | 22 |
liver primordium | 7.11e-25 | 22 |
septum transversum | 7.11e-25 | 22 |
liver bud | 7.11e-25 | 22 |
digestive tract diverticulum | 1.29e-23 | 23 |
sac | 1.29e-23 | 23 |
exocrine gland | 2.13e-21 | 25 |
exocrine system | 2.13e-21 | 25 |
tube | 4.34e-11 | 114 |
trunk mesenchyme | 4.06e-10 | 45 |
anatomical conduit | 6.55e-10 | 122 |
epithelial tube | 1.60e-09 | 47 |
abdomen element | 5.59e-09 | 49 |
abdominal segment element | 5.59e-09 | 49 |
abdominal segment of trunk | 5.59e-09 | 49 |
abdomen | 5.59e-09 | 49 |
gut epithelium | 1.37e-07 | 55 |