FFCP PHASE1:Mm9::chr6:117856512..117856520,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2157 | |MCL_coexpression_id=2157 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:117856512..117856520,- | |||
|description=CAGE_peak_at_chr6:117856512..117856520,- | |description=CAGE_peak_at_chr6:117856512..117856520,- | ||
|id=chr6:117856512..117856520,- | |id=chr6:117856512..117856520,- | ||
|ontology_enrichment_celltype=CL:0002563!4.17e-07!9;CL:0002251!4.17e-07!9 | |ontology_enrichment_celltype=CL:0002563!4.17e-07!9;CL:0002251!4.17e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.08e-25,3;CL:0002563,2.30e-22,9;CL:0002251,2.30e-22,9;CL:0000066,2.23e-15,25;CL:0000223,2.33e-14,20;CL:0002076,1.79e-13,15;CL:0000764,6.55e-12,3;CL:0000765,6.55e-12,3;CL:0000038,6.55e-12,3;CL:0000547,6.55e-12,3;CL:0000213,1.73e-09,1;CL:0002078,1.73e-09,1;CL:0000115,1.73e-09,1;CL:0002262,1.73e-09,1;CL:1000398,1.73e-09,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,6.55e-12,3;DOID:0060083,6.55e-12,3;DOID:1240,6.55e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!4.17e-07!9;UBERON:0004808!4.17e-07!9;UBERON:0001277!4.17e-07!9 | |ontology_enrichment_uberon=UBERON:0003350!4.17e-07!9;UBERON:0004808!4.17e-07!9;UBERON:0001277!4.17e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.30e-22,9;UBERON:0004808,2.30e-22,9;UBERON:0001277,2.30e-22,9;UBERON:0000485,2.49e-18,11;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0000344,1.79e-13,15;UBERON:0002394,1.73e-09,1;UBERON:0001281,1.73e-09,1;UBERON:0000353,1.73e-09,1;UBERON:0003497,1.73e-09,1;UBERON:0003909,1.73e-09,1;UBERON:0003928,1.73e-09,1;UBERON:0003835,1.73e-09,1;UBERON:0003513,1.73e-09,1;UBERON:0001280,1.73e-09,1;UBERON:0004647,1.73e-09,1;UBERON:0002294,1.73e-09,1;UBERON:0001173,1.73e-09,1;UBERON:0004912,1.73e-09,1;UBERON:0005171,1.73e-09,1;UBERON:0004923,1.95e-08,24;UBERON:0003929,9.18e-07,55 | |||
|phase1_expression=0,2.09385244583617,0,0.90739263392049,1.00179145989269,0.503637815735669,0.934450562382103,0,1.12630977721333,0.234064526321993,0,0.159544317990673,0.513602189793617,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0,0,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,1.14846392823004,0,0.215471232685889,0,0,0.221730510655305,5.71527606113668,2.46025915033828,0,5.77703239502549,2.32728503501889,5.51257261908397,0.418531630736908,0,0,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.378212160335639,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0.482443521363367,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0.316011120628178,0.405450430580328,0,0.25984164595559,0.716106782669926,0,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0.463735671240843 | |phase1_expression=0,2.09385244583617,0,0.90739263392049,1.00179145989269,0.503637815735669,0.934450562382103,0,1.12630977721333,0.234064526321993,0,0.159544317990673,0.513602189793617,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0,0,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,1.14846392823004,0,0.215471232685889,0,0,0.221730510655305,5.71527606113668,2.46025915033828,0,5.77703239502549,2.32728503501889,5.51257261908397,0.418531630736908,0,0,0.588231488031014,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.378212160335639,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0.147610147979602,0.31399745568275,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0.482443521363367,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0.316011120628178,0.405450430580328,0,0.25984164595559,0.716106782669926,0,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0.463735671240843 | ||
|short_description=p@chr6:117856512..117856520,- | |short_description=p@chr6:117856512..117856520,- | ||
}} | }} |
Latest revision as of 23:49, 4 August 2015
Short description: | p@chr6:117856512..117856520, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117856512..117856520, - |
Coexpression cluster: | MCL_coexpression_mm9:2157 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.08e-25 | 3 |
intestinal epithelial cell | 2.30e-22 | 9 |
epithelial cell of alimentary canal | 2.30e-22 | 9 |
epithelial cell | 2.23e-15 | 25 |
endodermal cell | 2.33e-14 | 20 |
endo-epithelial cell | 1.79e-13 | 15 |
erythroid lineage cell | 6.55e-12 | 3 |
erythroblast | 6.55e-12 | 3 |
erythroid progenitor cell | 6.55e-12 | 3 |
proerythroblast | 6.55e-12 | 3 |
lining cell | 1.73e-09 | 1 |
meso-epithelial cell | 1.73e-09 | 1 |
endothelial cell | 1.73e-09 | 1 |
endothelial cell of sinusoid | 1.73e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.73e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.30e-22 | 9 |
gastrointestinal system epithelium | 2.30e-22 | 9 |
intestinal epithelium | 2.30e-22 | 9 |
simple columnar epithelium | 2.49e-18 | 11 |
intestinal mucosa | 1.57e-15 | 13 |
wall of intestine | 1.57e-15 | 13 |
gastrointestinal system mucosa | 1.57e-15 | 13 |
mucosa | 1.79e-13 | 15 |
bile duct | 1.73e-09 | 1 |
hepatic sinusoid | 1.73e-09 | 1 |
parenchyma | 1.73e-09 | 1 |
abdomen blood vessel | 1.73e-09 | 1 |
sinusoid | 1.73e-09 | 1 |
digestive system duct | 1.73e-09 | 1 |
abdominal segment blood vessel | 1.73e-09 | 1 |
trunk blood vessel | 1.73e-09 | 1 |
liver parenchyma | 1.73e-09 | 1 |
liver lobule | 1.73e-09 | 1 |
biliary system | 1.73e-09 | 1 |
biliary tree | 1.73e-09 | 1 |
biliary bud | 1.73e-09 | 1 |
hepatic duct | 1.73e-09 | 1 |
organ component layer | 1.95e-08 | 24 |
gut epithelium | 9.18e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.55e-12 | 3 |
immune system cancer | 6.55e-12 | 3 |
leukemia | 6.55e-12 | 3 |