FFCP PHASE1:Mm9::chr15:27925075..27925093,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=338|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:27925075..27925093,-|id=chr15:27925075..27925093,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.83e-07,1;CL:0002078,1.83e-07,1;CL:0000115,1.83e-07,1;CL:0002262,1.83e-07,1;CL:1000398,1.83e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.91e-16!49;UBERON:0005173!3.91e-16!49;UBERON:0002417!3.91e-16!49;UBERON:0000916!3.91e-16!49;UBERON:0005177!5.57e-14!85;UBERON:0002113!7.19e-13!14;UBERON:0003918!7.19e-13!14;UBERON:0005095!7.19e-13!14;UBERON:0007687!7.19e-13!14;UBERON:0006554!6.82e-11!16;UBERON:0002100!7.16e-11!98;UBERON:0001008!4.42e-10!17;UBERON:0009569!4.43e-10!66;UBERON:0002107!9.30e-10!22;UBERON:0007499!9.30e-10!22;UBERON:0006925!9.30e-10!22;UBERON:0009497!9.30e-10!22;UBERON:0000015!9.30e-10!22;UBERON:0002423!9.30e-10!22;UBERON:0006235!9.30e-10!22;UBERON:0008835!9.30e-10!22;UBERON:0003894!9.30e-10!22;UBERON:0004161!9.30e-10!22;UBERON:0008836!9.30e-10!22;UBERON:0009854!3.47e-09!23;UBERON:0009856!3.47e-09!23;UBERON:0003104!2.31e-08!131;UBERON:0009142!2.31e-08!131;UBERON:0002365!3.48e-08!25;UBERON:0002330!3.48e-08!25;UBERON:0001264!4.88e-08!12;UBERON:0003922!4.88e-08!12;UBERON:0002114!4.88e-08!12;UBERON:0003923!4.88e-08!12;UBERON:0003924!4.88e-08!12;UBERON:0003921!4.88e-08!12;UBERON:0000489!1.26e-07!21;UBERON:0001045!2.77e-07!13;UBERON:0000466!5.67e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.21e-26,14;UBERON:0003918,2.21e-26,14;UBERON:0011143,2.21e-26,14;UBERON:0005095,2.21e-26,14;UBERON:0007687,2.21e-26,14;UBERON:0006554,2.31e-20,18;UBERON:0001008,2.97e-19,19;UBERON:0000489,2.39e-17,21;UBERON:0005172,4.42e-16,49;UBERON:0005173,4.42e-16,49;UBERON:0002417,4.42e-16,49;UBERON:0000916,4.42e-16,49;UBERON:0005177,2.84e-15,79;UBERON:0002100,3.32e-13,90;UBERON:0003104,1.25e-12,61;UBERON:0009142,1.25e-12,61;UBERON:0009569,1.46e-11,66;UBERON:0003103,4.72e-08,43;UBERON:0002394,1.83e-07,1;UBERON:0001281,1.83e-07,1;UBERON:0000353,1.83e-07,1;UBERON:0003497,1.83e-07,1;UBERON:0003909,1.83e-07,1;UBERON:0003928,1.83e-07,1;UBERON:0003835,1.83e-07,1;UBERON:0003513,1.83e-07,1;UBERON:0001280,1.83e-07,1;UBERON:0004647,1.83e-07,1;UBERON:0002294,1.83e-07,1;UBERON:0001173,1.83e-07,1;UBERON:0004912,1.83e-07,1;UBERON:0005171,1.83e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,4.63783181922684,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0.658795818896044,0.502670417600539,0,0,0,0,0,0.569003702859245,1.02823661348756,0,1.4255592949172,1.16371492300575,1.61312385747733,3.66771915320692,6.05201606716369,5.49495547444812,2.96153193412321,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0.549122826376163,5.75072826109418,1.86070473834252,0.624075346229121,1.01031551178845,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18502572539483,0.906970670894253,0.943025398779491,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr15:27925075..27925093,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=338 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:27925075..27925093,- | |||
|description=CAGE_peak_at_chr15:27925075..27925093,- | |||
|id=chr15:27925075..27925093,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.83e-07,1;CL:0002078,1.83e-07,1;CL:0000115,1.83e-07,1;CL:0002262,1.83e-07,1;CL:1000398,1.83e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.91e-16!49;UBERON:0005173!3.91e-16!49;UBERON:0002417!3.91e-16!49;UBERON:0000916!3.91e-16!49;UBERON:0005177!5.57e-14!85;UBERON:0002113!7.19e-13!14;UBERON:0003918!7.19e-13!14;UBERON:0005095!7.19e-13!14;UBERON:0007687!7.19e-13!14;UBERON:0006554!6.82e-11!16;UBERON:0002100!7.16e-11!98;UBERON:0001008!4.42e-10!17;UBERON:0009569!4.43e-10!66;UBERON:0002107!9.30e-10!22;UBERON:0007499!9.30e-10!22;UBERON:0006925!9.30e-10!22;UBERON:0009497!9.30e-10!22;UBERON:0000015!9.30e-10!22;UBERON:0002423!9.30e-10!22;UBERON:0006235!9.30e-10!22;UBERON:0008835!9.30e-10!22;UBERON:0003894!9.30e-10!22;UBERON:0004161!9.30e-10!22;UBERON:0008836!9.30e-10!22;UBERON:0009854!3.47e-09!23;UBERON:0009856!3.47e-09!23;UBERON:0003104!2.31e-08!131;UBERON:0009142!2.31e-08!131;UBERON:0002365!3.48e-08!25;UBERON:0002330!3.48e-08!25;UBERON:0001264!4.88e-08!12;UBERON:0003922!4.88e-08!12;UBERON:0002114!4.88e-08!12;UBERON:0003923!4.88e-08!12;UBERON:0003924!4.88e-08!12;UBERON:0003921!4.88e-08!12;UBERON:0000489!1.26e-07!21;UBERON:0001045!2.77e-07!13;UBERON:0000466!5.67e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.21e-26,14;UBERON:0003918,2.21e-26,14;UBERON:0011143,2.21e-26,14;UBERON:0005095,2.21e-26,14;UBERON:0007687,2.21e-26,14;UBERON:0006554,2.31e-20,18;UBERON:0001008,2.97e-19,19;UBERON:0000489,2.39e-17,21;UBERON:0005172,4.42e-16,49;UBERON:0005173,4.42e-16,49;UBERON:0002417,4.42e-16,49;UBERON:0000916,4.42e-16,49;UBERON:0005177,2.84e-15,79;UBERON:0002100,3.32e-13,90;UBERON:0003104,1.25e-12,61;UBERON:0009142,1.25e-12,61;UBERON:0009569,1.46e-11,66;UBERON:0003103,4.72e-08,43;UBERON:0002394,1.83e-07,1;UBERON:0001281,1.83e-07,1;UBERON:0000353,1.83e-07,1;UBERON:0003497,1.83e-07,1;UBERON:0003909,1.83e-07,1;UBERON:0003928,1.83e-07,1;UBERON:0003835,1.83e-07,1;UBERON:0003513,1.83e-07,1;UBERON:0001280,1.83e-07,1;UBERON:0004647,1.83e-07,1;UBERON:0002294,1.83e-07,1;UBERON:0001173,1.83e-07,1;UBERON:0004912,1.83e-07,1;UBERON:0005171,1.83e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,4.63783181922684,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0.658795818896044,0.502670417600539,0,0,0,0,0,0.569003702859245,1.02823661348756,0,1.4255592949172,1.16371492300575,1.61312385747733,3.66771915320692,6.05201606716369,5.49495547444812,2.96153193412321,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0.549122826376163,5.75072826109418,1.86070473834252,0.624075346229121,1.01031551178845,0.358794827043824,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18502572539483,0.906970670894253,0.943025398779491,0.590603785761546,0.614870295887855,1.03371317267288,0.727067458955011,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:27925075..27925093,- | |||
}} |
Latest revision as of 03:45, 5 August 2015
Short description: | p@chr15:27925075..27925093, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:27925075..27925093, - |
Coexpression cluster: | MCL_coexpression_mm9:338 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.83e-07 | 1 |
meso-epithelial cell | 1.83e-07 | 1 |
endothelial cell | 1.83e-07 | 1 |
endothelial cell of sinusoid | 1.83e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.21e-26 | 14 |
kidney mesenchyme | 2.21e-26 | 14 |
upper urinary tract | 2.21e-26 | 14 |
kidney rudiment | 2.21e-26 | 14 |
kidney field | 2.21e-26 | 14 |
urinary system structure | 2.31e-20 | 18 |
renal system | 2.97e-19 | 19 |
cavitated compound organ | 2.39e-17 | 21 |
abdomen element | 4.42e-16 | 49 |
abdominal segment element | 4.42e-16 | 49 |
abdominal segment of trunk | 4.42e-16 | 49 |
abdomen | 4.42e-16 | 49 |
trunk region element | 2.84e-15 | 79 |
trunk | 3.32e-13 | 90 |
mesenchyme | 1.25e-12 | 61 |
entire embryonic mesenchyme | 1.25e-12 | 61 |
subdivision of trunk | 1.46e-11 | 66 |
compound organ | 4.72e-08 | 43 |
bile duct | 1.83e-07 | 1 |
hepatic sinusoid | 1.83e-07 | 1 |
parenchyma | 1.83e-07 | 1 |
abdomen blood vessel | 1.83e-07 | 1 |
sinusoid | 1.83e-07 | 1 |
digestive system duct | 1.83e-07 | 1 |
abdominal segment blood vessel | 1.83e-07 | 1 |
trunk blood vessel | 1.83e-07 | 1 |
liver parenchyma | 1.83e-07 | 1 |
liver lobule | 1.83e-07 | 1 |
biliary system | 1.83e-07 | 1 |
biliary tree | 1.83e-07 | 1 |
biliary bud | 1.83e-07 | 1 |
hepatic duct | 1.83e-07 | 1 |