FFCP PHASE1:Mm9::chr1:173159948..173159963,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:173159948..173159963,- | |||
|description=CAGE_peak_at_chr1:173159948..173159963,- | |description=CAGE_peak_at_chr1:173159948..173159963,- | ||
|id=chr1:173159948..173159963,- | |id=chr1:173159948..173159963,- | ||
|ontology_enrichment_celltype=CL:0000557!6.45e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.47e-25,3;CL:0002540,4.47e-25,3;CL:0002194,4.72e-19,4;CL:0000766,4.72e-19,4;CL:0000234,4.72e-19,4;CL:0000576,4.72e-19,4;CL:0000235,4.72e-19,4;CL:0000864,4.72e-19,4;CL:0002009,4.72e-19,4;CL:0000040,4.72e-19,4;CL:0000559,4.72e-19,4;CL:0002476,1.07e-17,2;CL:0000473,3.64e-11,7;CL:0000557,3.64e-11,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.41e-11!32;UBERON:0002371!9.05e-10!16;UBERON:0001474!1.05e-09!22;UBERON:0004765!1.05e-09!22;UBERON:0001434!1.05e-09!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.04e-18,16;UBERON:0001474,3.10e-13,22;UBERON:0004765,3.10e-13,22;UBERON:0001434,3.10e-13,22;UBERON:0002204,3.77e-12,32;UBERON:0002390,1.78e-08,45;UBERON:0003061,1.78e-08,45;UBERON:0002193,6.43e-08,48;UBERON:0002405,6.43e-08,48 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,0,1.17646297606203,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,3.1496490104849,6.92206453796882,3.5524005747305,1.49800055259202,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0.508280908292259,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0.810676133875177,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0,7.53956419696361,17.9488875660174,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,1.36696704638282,0.619160603889667,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,0,1.17646297606203,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,3.1496490104849,6.92206453796882,3.5524005747305,1.49800055259202,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0.508280908292259,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0.810676133875177,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0,7.53956419696361,17.9488875660174,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,1.36696704638282,0.619160603889667,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0,0,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:173159948..173159963,- | |short_description=p@chr1:173159948..173159963,- | ||
}} | }} |
Latest revision as of 05:52, 5 August 2015
Short description: | p@chr1:173159948..173159963, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173159948..173159963, - |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 4.47e-25 | 3 |
mesenchymal stem cell of the bone marrow | 4.47e-25 | 3 |
monopoietic cell | 4.72e-19 | 4 |
myeloid leukocyte | 4.72e-19 | 4 |
phagocyte | 4.72e-19 | 4 |
monocyte | 4.72e-19 | 4 |
macrophage | 4.72e-19 | 4 |
tissue-resident macrophage | 4.72e-19 | 4 |
macrophage dendritic cell progenitor | 4.72e-19 | 4 |
monoblast | 4.72e-19 | 4 |
promonocyte | 4.72e-19 | 4 |
bone marrow macrophage | 1.07e-17 | 2 |
defensive cell | 3.64e-11 | 7 |
granulocyte monocyte progenitor cell | 3.64e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.04e-18 | 16 |
bone element | 3.10e-13 | 22 |
skeletal element | 3.10e-13 | 22 |
skeletal system | 3.10e-13 | 22 |
musculoskeletal system | 3.77e-12 | 32 |
hematopoietic system | 1.78e-08 | 45 |
blood island | 1.78e-08 | 45 |
hemolymphoid system | 6.43e-08 | 48 |
immune system | 6.43e-08 | 48 |