FFCP PHASE1:Mm9::chr12:77505391..77505413,+: Difference between revisions
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{{FFCP|EntrezGene=15512|HGNC=|MCL_coexpression_id=346|UniProt=P17156|association_with_transcript=34bp_to_NM_008301,uc011yoa.1_5end|description=CAGE_peak_2_at_Hspa2_5end|id=chr12:77505391..77505413,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.82e-10!102;UBERON:0000924!2.82e-10!102;UBERON:0006601!2.82e-10!102;UBERON:0000073!2.68e-09!75;UBERON:0001016!2.68e-09!75;UBERON:0001017!5.94e-09!73;UBERON:0005743!5.94e-09!73;UBERON:0005156!2.84e-08!26;UBERON:0000990!2.84e-08!26;UBERON:0003133!1.66e-07!24;UBERON:0002021!6.23e-07!10;UBERON:0000411!6.23e-07!10;UBERON:0001950!6.23e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.21e-10,95;UBERON:0000924,8.21e-10,95;UBERON:0006601,8.21e-10,95;UBERON:0001016,2.73e-09,75;UBERON:0001017,6.07e-09,73;UBERON:0005156,2.74e-08,26;UBERON:0000990,2.74e-08,26;UBERON:0003133,1.61e-07,24;UBERON:0010314,4.17e-07,92;UBERON:0002021,6.05e-07,10;UBERON:0000411,6.05e-07,10;UBERON:0001950,6.05e-07,10;UBERON:0000073,9.86e-07,54|phase1_expression=24.8230713012431,0.348975407639361,0.909998478779072,0.60492842261366,0,1.6787927191189,0.934450562382103,2.58246646883153,17.1762241025033,15.9163877898956,0,0.558405112967355,0.856003649656029,0.961624426608971,1.33243904726265,0.404950534779652,0,1.73504190947031,1.91960207048034,2.12194825899015,36.2284416043557,3.27660138962921,3.6567970479451,0.639969691173627,0.68822784320151,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0,16.5107975099504,9.84103660135312,0,1.1554064790051,0.332469290716985,3.87921776898501,2.92972141515835,3.906676722619,1.0470474879476,4.1176204162171,4.09827290975067,3.39857247121808,5.03587271902309,4.25783111121961,2.56965453026354,7.04152209913235,20.9304150125229,46.573470739708,46.2743159796795,25.8974880006921,24.4379359420452,9.39582593923324,4.35217285206807,3.36093799142464,9.26133969729409,6.5902691185914,15.4701627683233,1.61853168687678,2.64495489636016,3.1691570175309,7.45457970552091,13.3394219416671,2.2497492932035,0.988866362566974,2.1314403448383,62.6164230983466,158.29794179248,0.414758449233911,0.405017814995072,1.05162480675691,22.2807767834967,27.1668305370485,0.734944795289724,0.766763768145891,1.83843757322004,22.0231761998777,25.0267182646968,25.9595041203051,2.76961204233407,2.65314166446988,1.56274011167028,15.6342479440773,28.7008931116157,32.5460267764606,11.490514833473,11.5321061447273,1.86399445825301,5.98236927332154,13.754023939435,39.4215704634282,1.72084775396277,2.03991400112325,2.15881276655127,1.29955283489534,2.68816132258401,8.84799846830037,6.47635225796619,4.41636207824877,7.77347063922748,29.9996484124329,1.28326477414318,5.09610479413291,0,11.2575341325831,15.454951793981,14.1546844604139,7.9928715803342,1.8125651855302,8.16431764856536,4.68410382268567,6.39377504455497,5.5347719341454,3.91878865436819,5.64425794251383,10.4303270803631,15.8204779349999,8.09756398751505,6.19227386364912,5.01477234836968,6.62524555381181,4.363877278217,1.86391761218122,7.90508151931177,8.79676168616511,8.68553987709211,3.35482348616577,2.99951365496704,2.54140454146129,14.8292733010774,18.7575247155637,4.14659361972453,21.9018643442268,25.3158302757027,15.1685272528479,21.5780879880118,10.7949725681335,13.1871388846699,22.492325500597,3.78795340595653,2.73252930221678,4.36813998423599,3.96136685571768,3.61691562805716,3.74200745332303,4.09963904911519,3.65436725782942,4.9153640440413,1.94011193639558,1.32374256117473,2.28736461413134,2.41115305670332,3.89266148915837,5.2237824978325,7.81972118350185,5.9710280045548,2.1066395619397,5.40430604940902,6.53576048609863,8.90640821902658,6.56672967947069,6.48223421259654,7.81257627431194,5.3126342571799,5.24508183817086,7.44108623201305,8.31647544338819,4.67061369468678,4.77223564749093,8.70087559619205,7.94474333549386,7.74859933354261,4.39100230582101,3.48936688776967,34.697841513081,7.71784592844633,0,4.23120906661671,2.34617075588757,1.62565670302307,3.47942145569652,3.83198696784351,4.44756087689741,5.89699440948933,7.59246498471219,14.987604879885,11.3100843960121,6.96347652144028,11.5028811400281,10.7858329038507,7.13255564586491,9.55878111620963,2.46568271239006,2.62771579002376,0,4.68398054044223,5.23671715352589,3.99774173374816,7.27220176928959,7.38050739898011,7.22194148070324,6.78684401569903,4.74324203339438,1.16791574001266,1.76903095601883,0.449724224769707,0.405720242777006,0.482354319504834,0.763877555344259,0.863088412352432,2.59416362840057,1.92192989231657,1.43768206527355,0.744281895337007,1.24815069245824,1.26289438973556,0.896987067609561,2.41221760681684,16.2582807346612,2.27389694124582,1.95557971730431,1.86719594352707,3.75504397261603,4.85768146581266,10.4739201989846,14.6350235893349,8.82756806994669,8.858587585951,10.5240147313941,10.3233888270915,13.4694285855399,8.53429445630918,3.01582567878545,2.17562273527484,2.45882136509518,0.827810238914197,12.6834966090356,13.010497211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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15512 | |||
|HGNC= | |||
|MCL_coexpression_id=346 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P17156 | |||
|association_with_transcript=34bp_to_NM_008301,uc011yoa.1_5end | |||
|cluster_id=chr12:77505391..77505413,+ | |||
|description=CAGE_peak_2_at_Hspa2_5end | |||
|id=chr12:77505391..77505413,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.82e-10!102;UBERON:0000924!2.82e-10!102;UBERON:0006601!2.82e-10!102;UBERON:0000073!2.68e-09!75;UBERON:0001016!2.68e-09!75;UBERON:0001017!5.94e-09!73;UBERON:0005743!5.94e-09!73;UBERON:0005156!2.84e-08!26;UBERON:0000990!2.84e-08!26;UBERON:0003133!1.66e-07!24;UBERON:0002021!6.23e-07!10;UBERON:0000411!6.23e-07!10;UBERON:0001950!6.23e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.21e-10,95;UBERON:0000924,8.21e-10,95;UBERON:0006601,8.21e-10,95;UBERON:0001016,2.73e-09,75;UBERON:0001017,6.07e-09,73;UBERON:0005156,2.74e-08,26;UBERON:0000990,2.74e-08,26;UBERON:0003133,1.61e-07,24;UBERON:0010314,4.17e-07,92;UBERON:0002021,6.05e-07,10;UBERON:0000411,6.05e-07,10;UBERON:0001950,6.05e-07,10;UBERON:0000073,9.86e-07,54 | |||
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| |||
|short_description=p2@Hspa2 | |||
}} |
Revision as of 06:19, 5 August 2015
Short description: | p2@Hspa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hspa2_5end |
Coexpression cluster: | MCL_coexpression_mm9:346 |
Association with transcript: | 34bp_to_NM_008301, uc011yoa.1_5end |
EntrezGene: | 15512 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.21e-10 | 95 |
ectoderm | 8.21e-10 | 95 |
presumptive ectoderm | 8.21e-10 | 95 |
nervous system | 2.73e-09 | 75 |
central nervous system | 6.07e-09 | 73 |
reproductive structure | 2.74e-08 | 26 |
reproductive system | 2.74e-08 | 26 |
reproductive organ | 1.61e-07 | 24 |
structure with developmental contribution from neural crest | 4.17e-07 | 92 |
occipital lobe | 6.05e-07 | 10 |
visual cortex | 6.05e-07 | 10 |
neocortex | 6.05e-07 | 10 |
regional part of nervous system | 9.86e-07 | 54 |