FFCP PHASE1:Mm9::chr4:155434167..155434177,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:155434167..155434177,+ | |||
|description=CAGE_peak_at_chr4:155434167..155434177,+ | |description=CAGE_peak_at_chr4:155434167..155434177,+ | ||
|id=chr4:155434167..155434177,+ | |id=chr4:155434167..155434177,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.45e-27!9;CL:0002251!3.45e-27!9;CL:0000239!2.56e-18!6;CL:0000677!2.56e-18!6;CL:0000212!2.56e-18!6;CL:0000584!2.56e-18!6;CL:0002076!1.28e-15!15;CL:0000075!1.33e-15!7;CL:0000066!1.38e-15!25;CL:0000223!5.32e-14!20;CL:0002250!1.95e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.41e-68,9;CL:0002251,1.41e-68,9;CL:0002076,3.42e-41,15;CL:0000239,6.87e-40,6;CL:0000677,6.87e-40,6;CL:0000584,6.87e-40,6;CL:0000223,4.97e-39,20;CL:0000075,2.98e-34,7;CL:0000066,3.19e-31,25;CL:0002250,1.16e-30,3;CL:0002321,4.95e-11,70;CL:0000213,5.74e-11,1;CL:0002078,5.74e-11,1;CL:0000115,5.74e-11,1;CL:0002262,5.74e-11,1;CL:1000398,5.74e-11,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.45e-27!9;UBERON:0004808!3.45e-27!9;UBERON:0001277!3.45e-27!9;UBERON:0000344!6.64e-23!15;UBERON:0000485!6.24e-22!11;UBERON:0001242!2.73e-18!13;UBERON:0000060!2.73e-18!13;UBERON:0001262!2.73e-18!13;UBERON:0004786!2.73e-18!13;UBERON:0004923!4.58e-16!24;UBERON:0005409!3.36e-12!59;UBERON:0000160!7.93e-11!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.41e-68,9;UBERON:0004808,1.41e-68,9;UBERON:0001277,1.41e-68,9;UBERON:0000485,3.89e-56,11;UBERON:0001242,1.62e-47,13;UBERON:0001262,1.62e-47,13;UBERON:0004786,1.62e-47,13;UBERON:0000344,3.42e-41,15;UBERON:0004923,9.57e-26,24;UBERON:0000160,6.51e-20,31;UBERON:0003929,4.10e-14,55;UBERON:0005409,4.47e-13,47;UBERON:0000490,1.02e-11,66;UBERON:0005911,3.39e-11,69;UBERON:0002394,5.74e-11,1;UBERON:0001281,5.74e-11,1;UBERON:0000353,5.74e-11,1;UBERON:0003497,5.74e-11,1;UBERON:0003909,5.74e-11,1;UBERON:0003928,5.74e-11,1;UBERON:0003835,5.74e-11,1;UBERON:0003513,5.74e-11,1;UBERON:0001280,5.74e-11,1;UBERON:0004647,5.74e-11,1;UBERON:0002294,5.74e-11,1;UBERON:0001173,5.74e-11,1;UBERON:0004912,5.74e-11,1;UBERON:0005171,5.74e-11,1 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,1.20985684522732,4.50806156951712,1.51091344720701,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,21.086168241843,4.98703936075477,20.0085969137122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.909998478779072,1.20985684522732,4.50806156951712,1.51091344720701,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,21.086168241843,4.98703936075477,20.0085969137122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:155434167..155434177,+ | |short_description=p@chr4:155434167..155434177,+ | ||
}} | }} |
Latest revision as of 07:55, 5 August 2015
Short description: | p@chr4:155434167..155434177, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:155434167..155434177, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.41e-68 | 9 |
epithelial cell of alimentary canal | 1.41e-68 | 9 |
endo-epithelial cell | 3.42e-41 | 15 |
brush border epithelial cell | 6.87e-40 | 6 |
gut absorptive cell | 6.87e-40 | 6 |
enterocyte | 6.87e-40 | 6 |
endodermal cell | 4.97e-39 | 20 |
columnar/cuboidal epithelial cell | 2.98e-34 | 7 |
epithelial cell | 3.19e-31 | 25 |
intestinal crypt stem cell | 1.16e-30 | 3 |
embryonic cell | 4.95e-11 | 70 |
lining cell | 5.74e-11 | 1 |
meso-epithelial cell | 5.74e-11 | 1 |
endothelial cell | 5.74e-11 | 1 |
endothelial cell of sinusoid | 5.74e-11 | 1 |
endothelial cell of hepatic sinusoid | 5.74e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.41e-68 | 9 |
gastrointestinal system epithelium | 1.41e-68 | 9 |
intestinal epithelium | 1.41e-68 | 9 |
simple columnar epithelium | 3.89e-56 | 11 |
intestinal mucosa | 1.62e-47 | 13 |
wall of intestine | 1.62e-47 | 13 |
gastrointestinal system mucosa | 1.62e-47 | 13 |
mucosa | 3.42e-41 | 15 |
organ component layer | 9.57e-26 | 24 |
intestine | 6.51e-20 | 31 |
gut epithelium | 4.10e-14 | 55 |
gastrointestinal system | 4.47e-13 | 47 |
unilaminar epithelium | 1.02e-11 | 66 |
endo-epithelium | 3.39e-11 | 69 |
bile duct | 5.74e-11 | 1 |
hepatic sinusoid | 5.74e-11 | 1 |
parenchyma | 5.74e-11 | 1 |
abdomen blood vessel | 5.74e-11 | 1 |
sinusoid | 5.74e-11 | 1 |
digestive system duct | 5.74e-11 | 1 |
abdominal segment blood vessel | 5.74e-11 | 1 |
trunk blood vessel | 5.74e-11 | 1 |
liver parenchyma | 5.74e-11 | 1 |
liver lobule | 5.74e-11 | 1 |
biliary system | 5.74e-11 | 1 |
biliary tree | 5.74e-11 | 1 |
biliary bud | 5.74e-11 | 1 |
hepatic duct | 5.74e-11 | 1 |