FFCP PHASE1:Mm9::chr7:54093824..54093847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:54093824..54093847,+ | |||
|description=CAGE_peak_at_chr7:54093824..54093847,+ | |description=CAGE_peak_at_chr7:54093824..54093847,+ | ||
|id=chr7:54093824..54093847,+ | |id=chr7:54093824..54093847,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.96e-11,9;CL:0000192,4.19e-09,3;CL:0000359,4.19e-09,3;CL:0002539,4.19e-09,3;CL:0000514,4.19e-09,3;CL:0000222,8.15e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.19e-09,3;DOID:4045,2.19e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,4.38e-13,10;UBERON:0001134,4.96e-11,9;UBERON:0002036,4.96e-11,9;UBERON:0002385,4.96e-11,9;UBERON:0000486,4.96e-11,9;UBERON:0007503,4.96e-11,9;UBERON:0001015,4.96e-11,9;UBERON:0002329,4.96e-11,9;UBERON:0003082,4.96e-11,9;UBERON:0003059,4.96e-11,9;UBERON:0007282,4.96e-11,9;UBERON:0004290,4.96e-11,9;UBERON:0009618,4.96e-11,9;UBERON:0000055,1.54e-09,5;UBERON:0007500,1.54e-09,5;UBERON:0001981,1.54e-09,5;UBERON:0002049,1.54e-09,5;UBERON:0007798,1.54e-09,5;UBERON:0004537,1.54e-09,5;UBERON:0006965,1.54e-09,5;UBERON:0001135,4.19e-09,3;UBERON:0004237,4.19e-09,3;UBERON:0004695,4.19e-09,3;UBERON:0002111,4.19e-09,3;UBERON:0004178,4.19e-09,3;UBERON:0007524,6.60e-09,11;UBERON:0003077,6.60e-09,11;UBERON:0007285,6.60e-09,11;UBERON:0000947,6.32e-07,4;UBERON:0001637,6.32e-07,4;UBERON:0004573,6.32e-07,4;UBERON:0003509,6.32e-07,4;UBERON:0004571,6.32e-07,4;UBERON:0010191,6.32e-07,4;UBERON:0004572,6.32e-07,4 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,2.72217790176147,3.00537437967808,0,0.233612640595526,0.258246646883153,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0.202475267389826,0,0,0,0,0.255129870453209,0.794327609607082,0,0.159992422793407,1.60586496747019,0,0.430761996159075,0,0,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0.408338712524738,10.4632907684227,1.5626706890476,1.57057123192139,15.2940186888064,5.46436387966757,3.39857247121808,1.38486499773135,2.02753862439029,2.20256102594018,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.599200221036809,0.768436610643109,0,0.135005938331691,0,0,0.220868540951614,0,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0,0,0,3.76823835312181,0,0,0.539703191637817,0.649776417447669,0,0,2.21559419351475,1.55871602761721,2.12003744706204,0,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0,0.258937883647172,0,0,0.608930956624282,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0.599902730993408,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,0,0.248813941220186,0,2.73574412652416,0.260240885925407,0,0.180062129805349,0.150704817835715,0.95251098811859,2.94661556655154,3.84177070694888,12.9351685369508,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.205809224758569,1.32167513193519,1.32225283331772,0.213288250535234,0.464473343720877,0,0,0,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.189709611372772,0.738050739898011,0.627994911365499,0.616985819609003,0.296452627087149,0,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0.823684239564244,0,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,0.184753190166605,0.37898282354097,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,2.17562273527484,0.983528546038072,0.551873492609465,0.160550589987792,0,0,1.26235463602186,0.94652465824877,0.390438744296638,1.07711698866399,0.716906393857656,1.33679204449436,0,0.809621403349789,1.16902343164525,0.790575555893047,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0.340439605753788,0,0.258717367565509,0.857348140126369,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0,0.8244312647074,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0.185194527369712,0,0,0.228778173206523,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0.388844919875379,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0.487289403698762,0.0962118416403295,0.701261413089414,0.226730383615211,0.443971906748129,0.986852422704233,0.839423081820392,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,1.5107877947794,0,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0.470546902076653,0.169229215783353,0.365855945745545,0,0.407412341537585,1.12228454331548,0.237270036248348,0.0985044823755635,0,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421 | |phase1_expression=0,1.04692622291808,0.909998478779072,2.72217790176147,3.00537437967808,0,0.233612640595526,0.258246646883153,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0.202475267389826,0,0,0,0,0.255129870453209,0.794327609607082,0,0.159992422793407,1.60586496747019,0,0.430761996159075,0,0,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.332469290716985,0.408338712524738,10.4632907684227,1.5626706890476,1.57057123192139,15.2940186888064,5.46436387966757,3.39857247121808,1.38486499773135,2.02753862439029,2.20256102594018,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.599200221036809,0.768436610643109,0,0.135005938331691,0,0,0.220868540951614,0,0,0.919218786610021,0,0,0,0,0,0.52091337055676,0.279182999001381,0,0.15279824777681,0,0,0,0,0,3.76823835312181,0,0,0.539703191637817,0.649776417447669,0,0,2.21559419351475,1.55871602761721,2.12003744706204,0,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0,0.258937883647172,0,0,0.608930956624282,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0,0.766371165625774,0,0.599902730993408,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,0,0.248813941220186,0,2.73574412652416,0.260240885925407,0,0.180062129805349,0.150704817835715,0.95251098811859,2.94661556655154,3.84177070694888,12.9351685369508,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.205809224758569,1.32167513193519,1.32225283331772,0.213288250535234,0.464473343720877,0,0,0,0.380451252225118,0,0.494096864172033,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.189709611372772,0.738050739898011,0.627994911365499,0.616985819609003,0.296452627087149,0,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0.823684239564244,0,0.372140947668503,0.624075346229121,0.252578877947112,0.358794827043824,0,0.184753190166605,0.37898282354097,0,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,2.17562273527484,0.983528546038072,0.551873492609465,0.160550589987792,0,0,1.26235463602186,0.94652465824877,0.390438744296638,1.07711698866399,0.716906393857656,1.33679204449436,0,0.809621403349789,1.16902343164525,0.790575555893047,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0.340439605753788,0,0.258717367565509,0.857348140126369,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0,0.8244312647074,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0.185194527369712,0,0,0.228778173206523,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0,0.388844919875379,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.201652370273681,0.487289403698762,0.0962118416403295,0.701261413089414,0.226730383615211,0.443971906748129,0.986852422704233,0.839423081820392,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,1.5107877947794,0,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0,0.470546902076653,0.169229215783353,0.365855945745545,0,0.407412341537585,1.12228454331548,0.237270036248348,0.0985044823755635,0,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr7:54093824..54093847,+ | |short_description=p@chr7:54093824..54093847,+ | ||
}} | }} |
Latest revision as of 09:53, 5 August 2015
Short description: | p@chr7:54093824..54093847, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:54093824..54093847, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.96e-11 | 9 |
smooth muscle cell | 4.19e-09 | 3 |
vascular associated smooth muscle cell | 4.19e-09 | 3 |
aortic smooth muscle cell | 4.19e-09 | 3 |
smooth muscle myoblast | 4.19e-09 | 3 |
mesodermal cell | 8.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 4.38e-13 | 10 |
skeletal muscle tissue | 4.96e-11 | 9 |
striated muscle tissue | 4.96e-11 | 9 |
muscle tissue | 4.96e-11 | 9 |
multilaminar epithelium | 4.96e-11 | 9 |
epithelial vesicle | 4.96e-11 | 9 |
musculature | 4.96e-11 | 9 |
somite | 4.96e-11 | 9 |
myotome | 4.96e-11 | 9 |
presomitic mesoderm | 4.96e-11 | 9 |
presumptive segmental plate | 4.96e-11 | 9 |
dermomyotome | 4.96e-11 | 9 |
trunk paraxial mesoderm | 4.96e-11 | 9 |
vessel | 1.54e-09 | 5 |
epithelial tube open at both ends | 1.54e-09 | 5 |
blood vessel | 1.54e-09 | 5 |
vasculature | 1.54e-09 | 5 |
vascular system | 1.54e-09 | 5 |
blood vasculature | 1.54e-09 | 5 |
vascular cord | 1.54e-09 | 5 |
smooth muscle tissue | 4.19e-09 | 3 |
blood vessel smooth muscle | 4.19e-09 | 3 |
arterial system smooth muscle | 4.19e-09 | 3 |
artery smooth muscle tissue | 4.19e-09 | 3 |
aorta smooth muscle tissue | 4.19e-09 | 3 |
dense mesenchyme tissue | 6.60e-09 | 11 |
paraxial mesoderm | 6.60e-09 | 11 |
presumptive paraxial mesoderm | 6.60e-09 | 11 |
aorta | 6.32e-07 | 4 |
artery | 6.32e-07 | 4 |
systemic artery | 6.32e-07 | 4 |
arterial blood vessel | 6.32e-07 | 4 |
systemic arterial system | 6.32e-07 | 4 |
aortic system | 6.32e-07 | 4 |
arterial system | 6.32e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.19e-09 | 3 |
muscle cancer | 2.19e-09 | 3 |